RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 TMEM14DPA8MWL7 114 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 TRIM77I1YAP6 450 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 PDCD6O75340 191 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 CLPXO76031 633 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 PAHP00439 452 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 GLAP06280 429 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 JUNBP17275 347 aaPredicted RBP11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 OR10A3P58181 314 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 PAX5Q02548 391 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 NKAPLQ5M9Q1 402 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 OR52W1Q6IF63 320 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 PLPPR1Q8TBJ4 325 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 KCNK15Q9H427 330 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 ETAA1Q9NY74 926 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 RCC2Q9P258 522 aaKnown RBP11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 FBN3Q75N90 2809 aa11.46□□□□□ -0.58
GTF3C3-206ENST00000448539 A0A0U1RQK1 487 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 MDFIC2A0A1B0GVS7 189 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 SMIM30A4D0T7 59 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 TRIM64CA6NLI5 447 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 ZNF729A6NN14 1252 aaPredicted RBP11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 RNF212BA8MTL3 300 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 NOTOA8MTQ0 251 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 AIPO00170 330 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 VENTXO95231 258 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 FBP1P09467 338 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 CDK2P24941 298 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 QRFPP83859 136 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 SRSF2Q01130 221 aaKnown RBP11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 DYNC1I2Q13409 638 aaKnown RBP11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 UNC119Q13432 240 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 C2orf76Q3KRA6 126 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 MIDNQ504T8 468 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 PRAMEF5Q5TYX0 476 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 GDPGP1Q6ZNW5 385 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 MRGPRDQ8TDS7 321 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 ZNF48Q96MX3 618 aaPredicted RBP11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 TM2D1Q9BX74 207 aa11.45□□□□□ -0.58
GTF3C3-206ENST00000448539 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 UBE2QL1A1L167 161 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 AIREO43918 545 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 CA11O75493 328 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 ARG1P05089 322 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 GZMHP20718 246 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 BLVRBP30043 206 aaPredicted RBP11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 SDC2P34741 201 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 SAA4P35542 130 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 FAM189A2Q15884 450 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 HCP5Q6MZN7 132 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 HEPN1Q6WQI6 88 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 ZNF497Q6ZNH5 498 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 MRPS26Q9BYN8 205 aaKnown RBP11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 TMEM133Q9H2Q1 129 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 LIN7BQ9HAP6 207 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 CALYQ9NYX4 217 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 FBLN5Q9UBX5 448 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 RAB22AQ9UL26 194 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 TRAPPC2LQ9UL33 140 aa11.44□□□□□ -0.58
GTF3C3-206ENST00000448539 TRAV39A0A0B4J263 110 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 TMEM272A0A1B0GTI8 110 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 MT-ND4P03905 459 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 OMGP23515 440 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 NFYBP25208 207 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 MXD1Q05195 221 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 SIGIRRQ6IA17 410 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 Q6YL49 198 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 ZDHHC22Q8N966 263 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 OR56B1Q8NGI3 324 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 CCDC107Q8WV48 283 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 ZFAND2BQ8WV99 257 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 YIPF6Q96EC8 236 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 DUX5Q96PT3 197 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 NICN1Q9BSH3 213 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 CENPOQ9BU64 300 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 CLEC7AQ9BXN2 247 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 LPAR5Q9H1C0 372 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 PRDM13Q9H4Q3 707 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 RNF167Q9H6Y7 350 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 ZMAT3Q9HA38 289 aaKnown RBP11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 RAB9BQ9NP90 201 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 PLEKHJ1Q9NW61 149 aa11.43□□□□□ -0.58
GTF3C3-206ENST00000448539 IGHV2-26A0A0B4J1V2 119 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 BTBD17A6NE02 478 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 MMP23AO75900 390 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 IL1AP01583 271 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 MELTFP08582 738 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 SMIM18P0DKX4 95 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 CFPP27918 469 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 CHATP28329 748 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 VEGFCP49767 419 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 UBA52P62987 128 aaKnown RBP11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 LTC4SQ16873 150 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 C17orf58Q2M2W7 97 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 C6orf201Q7Z4U5 140 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 RTN4RL2Q86UN3 420 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms