RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PGA5P0DJD9 388 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 ERVK11-1P61568 191 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 HERPUD1Q15011 391 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 EIF2S3LQ2VIR3 472 aaKnown RBP11.62□□□□□ -0.55
RBM39-216ENST00000444878 SMUG1Q53HV7 270 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 C1orf185Q5T7R7 199 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 Q6P435 159 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 C20orf204Q6ZNR8 217 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 LIAT1Q6ZQX7 453 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 FAM219AQ8IW50 185 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 FOXRED2Q8IWF2 684 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 PDZD9Q8IXQ8 264 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 ZNF565Q8N9K5 539 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 SECTM1Q8WVN6 248 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 CXorf58Q96LI9 332 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 NRIP2Q9BQI9 281 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 AMDHD2Q9Y303 409 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 FAM215AQ9Y5M1 114 aa11.62□□□□□ -0.55
RBM39-216ENST00000444878 ATMQ13315 3056 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 IGHV1-18A0A0C4DH31 117 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 PROB1E7EW31 1015 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 PHF1O43189 567 aaPredicted RBP11.61□□□□□ -0.55
RBM39-216ENST00000444878 FABP6P51161 128 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 FOXC1Q12948 553 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 AANATQ16613 207 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 ZNF718Q3SXZ3 478 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 PAN3Q58A45 887 aaKnown RBP11.61□□□□□ -0.55
RBM39-216ENST00000444878 TOR2AQ5JU69 321 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 SPIN3Q5JUX0 258 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 RGS7BPQ6MZT1 257 aaPredicted RBP11.61□□□□□ -0.55
RBM39-216ENST00000444878 FAM185AQ8N0U4 392 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 LGI3Q8N145 548 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 GLYATL2Q8WU03 294 aa11.61□□□□□ -0.55
RBM39-216ENST00000444878 IGHV2OR16-5A0A0B4J2B6 119 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 SIRPB1O00241 398 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 MPPED1O15442 326 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 MLNRO43193 412 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 OR2H2O95918 312 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 RCC1P18754 421 aaPredicted RBP11.6□□□□□ -0.55
RBM39-216ENST00000444878 GCH1P30793 250 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 GNRHRP30968 328 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 MDH2P40926 338 aaKnown RBP11.6□□□□□ -0.55
RBM39-216ENST00000444878 P2RX3P56373 397 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 KRTCAP3Q53RY4 240 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 FAM180AQ6UWF9 173 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 RPRMLQ8N4K4 120 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 LRTM2Q8N967 370 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 RELL2Q8NC24 303 aaPredicted RBP11.6□□□□□ -0.55
RBM39-216ENST00000444878 OR1S1Q8NH92 325 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 MSI2Q96DH6 328 aaKnown RBP11.6□□□□□ -0.55
RBM39-216ENST00000444878 PHYHIPLQ96FC7 376 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 CNTNAP3BQ96NU0 1288 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 COL25A1Q9BXS0 654 aaPredicted RBP11.6□□□□□ -0.55
RBM39-216ENST00000444878 CNTNAP3Q9BZ76 1288 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 SLC25A32Q9H2D1 315 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 TUBD1Q9UJT1 453 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 FZR1Q9UM11 496 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 SLC25A15Q9Y619 301 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 C3orf85A0A1B0GTC6 90 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 hCG_1807616A0A1W2PRN6 198 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 MSGN1A6NI15 193 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 TUSC2O75896 110 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 SMCO1Q147U7 214 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 ZNF146Q15072 292 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 OR4A4PQ8NGN8 299 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 AQP10Q96PS8 301 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 MED9Q9NWA0 146 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 TREM2Q9NZC2 230 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 DNAJB11Q9UBS4 358 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 PCDHB10Q9UN67 800 aa11.6□□□□□ -0.55
RBM39-216ENST00000444878 ICE1Q9Y2F5 2266 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 H7C1Q1 480 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 GPR31O00270 319 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 SLC33A1O00400 549 aaPredicted RBP11.59□□□□□ -0.55
RBM39-216ENST00000444878 SH2D1BO14796 132 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 KITLGP21583 273 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 TIMP3P35625 211 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 KCNJ3P48549 501 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 HLA-DRB3P79483 266 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 FAM74A1Q5RGS3 127 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 ZNF880Q6PDB4 577 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 ZNF474Q6S9Z5 364 aaPredicted RBP11.59□□□□□ -0.55
RBM39-216ENST00000444878 MEX3BQ6ZN04 569 aaKnown RBP11.59□□□□□ -0.55
RBM39-216ENST00000444878 C1orf174Q8IYL3 243 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 OR10J5Q8NHC4 309 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 MARVELD3Q96A59 401 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 TP53RKQ96S44 253 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 SLC5A7Q9GZV3 580 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 CXXC4Q9H2H0 198 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 SDHAF2Q9NX18 166 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 PIEZO2Q9H5I5 2752 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 IGKV1D-13A0A0B4J2D9 117 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 A6NLC8 198 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 IGKV1-13P0DP09 117 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 TMEM11P17152 192 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 SNTB1Q13884 538 aaKnown RBP11.59□□□□□ -0.55
RBM39-216ENST00000444878 PCSK4Q6UW60 755 aa11.59□□□□□ -0.55
RBM39-216ENST00000444878 ZNF818PQ6ZRF7 136 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms