RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 SMIM4Q8WVI0 70 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 KCTD12Q96CX2 325 aaKnown RBP5.09□□□□□ -1.6
PTPRR-204ENST00000440835 DNAJA3Q96EY1 480 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF48Q96MX3 618 aaPredicted RBP5.09□□□□□ -1.6
PTPRR-204ENST00000440835 TEAD3Q99594 435 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 C2orf88Q9BSF0 95 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 ALG12Q9BV10 488 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 TOLLIPQ9H0E2 274 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 ISG20L2Q9H9L3 353 aaKnown RBP5.09□□□□□ -1.6
PTPRR-204ENST00000440835 ELOVL3Q9HB03 270 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 EXOGQ9Y2C4 368 aaKnown RBP5.09□□□□□ -1.6
PTPRR-204ENST00000440835 MMP24Q9Y5R2 645 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 ALPK2Q86TB3 2170 aa5.09□□□□□ -1.6
PTPRR-204ENST00000440835 RFPL4AA6NLU0 287 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 F5H5P2 479 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 RFPL4AL1F8VTS6 287 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 RNF13O43567 381 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 PLPP2O43688 288 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 KHDRBS3O75525 346 aaKnown RBP5.08□□□□□ -1.6
PTPRR-204ENST00000440835 MPZL1O95297 269 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 HCKP08631 526 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 CTXN2P0C2S0 81 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 PGA4P0DJD7 388 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 PGA3P0DJD8 388 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 B4GALT1P15291 398 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 GCH1P30793 250 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SDHAP31040 664 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SLC25A1P53007 311 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 F2RL1P55085 397 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 BIDP55957 195 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 RPL15P61313 204 aaKnown RBP5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ACSM1Q08AH1 577 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 PHYHD1Q5SRE7 291 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 DNM1P34Q6PK57 102 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SSX6Q7RTT6 188 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.08□□□□□ -1.6
PTPRR-204ENST00000440835 FOXRED2Q8IWF2 684 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 FAM185AQ8N0U4 392 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF561Q8N587 486 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 MAFIPQ8WZ33 124 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 CPNE2Q96FN4 548 aaPredicted RBP5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SYT3Q9BQG1 590 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SEC11CQ9BY50 192 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 HAO2Q9NYQ3 351 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 KLK11Q9UBX7 282 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 POMT1Q9Y6A1 747 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SNRPGP15A8MWD9 76 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 MCIDASD6RGH6 385 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 M0QZK8 103 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 AP4M1O00189 453 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 WIPF1O43516 503 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 YIF1AO95070 293 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 TXNDC12O95881 172 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ASAH2BP0C7U1 165 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 EGR1P18146 543 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ATF1P18846 271 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 PSMB6P28072 239 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 AQP2P41181 271 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 TAS2R43P59537 309 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 KCNMB1Q16558 191 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 AWAT1Q58HT5 328 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SLC16A14Q7RTX9 510 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SLC36A1Q7Z2H8 476 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 LRRTM1Q86UE6 522 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF584Q8IVC4 421 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 MUC20Q8N307 709 aaPredicted RBP5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ACBD7Q8N6N7 88 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 C15orf54Q8N8G6 183 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 NOXO1Q8NFA2 376 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 OR52I2Q8NH67 350 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF837Q96EG3 531 aaPredicted RBP5.08□□□□□ -1.6
PTPRR-204ENST00000440835 CNN2Q99439 309 aaKnown RBP5.08□□□□□ -1.6
PTPRR-204ENST00000440835 SAP30LQ9HAJ7 183 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 TMEM140Q9NV12 185 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 UQCC1Q9NVA1 299 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF230Q9UIE0 474 aaPredicted RBP5.08□□□□□ -1.6
PTPRR-204ENST00000440835 FAM96BQ9Y3D0 163 aa5.08□□□□□ -1.6
PTPRR-204ENST00000440835 DAPL1A0PJW8 107 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 IGHMP01871 453 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 IL5P05113 134 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 CLEC3BP05452 202 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 CST2P09228 141 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 PTHLHP12272 177 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 TNFRSF1AP19438 455 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 PAX6P26367 422 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 DDTP30046 118 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 CLRN1P58418 232 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 ACTA2P62736 377 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 ACTG2P63267 376 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 PITPNAQ00169 270 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 RPL18Q07020 188 aaKnown RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 TRAM1Q15629 374 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 MSMPQ1L6U9 139 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 FAHD2BQ6P2I3 314 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF322Q6U7Q0 402 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 THSD4Q6ZMP0 1018 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 FOXL2NBQ6ZUU3 175 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 KDM8Q8N371 416 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 OR2AK2Q8NG84 335 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 OR4K13Q8NH42 304 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms