RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 UBE2J1Q9Y385 318 aaPredicted RBP10.51□□□□□ -0.73
SCLT1-202ENST00000439369 LINC00312Q9Y6C7 94 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 ARID1AO14497 2285 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 MEIKINA0A087WXM9 373 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 TRGV10A0A0A0MS01 117 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 PPIAL4CA0A0B4J2A2 164 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 KIR2DS1A0A191URI9 304 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 SSX5O60225 188 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 FCN3O75636 299 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 DIRAS3O95661 229 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 FCGR3AP08637 254 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 GZMHP20718 246 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 RCVRNP35243 200 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 KIR2DS4P43632 304 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 GLIPR1P48060 266 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 PPP5CP53041 499 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 EDDM3BP56851 147 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 ACTBP60709 375 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 RPL31P62899 125 aaKnown RBP10.5□□□□□ -0.73
SCLT1-202ENST00000439369 ACTG1P63261 375 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 EDDM3AQ14507 147 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 KIR2DS1Q14954 304 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 TMEM30BQ3MIR4 351 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 PYDC2Q56P42 97 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 TRAPPC6BQ86SZ2 158 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 RTN4RL2Q86UN3 420 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF565Q8N9K5 539 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 LY6G5BQ8NDX9 201 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 MRPL30Q8TCC3 161 aaKnown RBP10.5□□□□□ -0.73
SCLT1-202ENST00000439369 TSC22D3Q99576 134 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 CCDC32Q9BV29 185 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 SRRQ9GZT4 340 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 NARFLQ9H6Q4 476 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 CHMP1AQ9HD42 196 aaPredicted RBP10.5□□□□□ -0.73
SCLT1-202ENST00000439369 TAS2R8Q9NYW2 309 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 TAS2R3Q9NYW6 316 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 MTFP1Q9UDX5 166 aa10.5□□□□□ -0.73
SCLT1-202ENST00000439369 RPUSD1Q9UJJ7 312 aaKnown RBP10.5□□□□□ -0.73
SCLT1-202ENST00000439369 LOC105371242A0A075B767 164 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 KIAA1324LA8MWY0 1029 aaPredicted RBP10.49□□□□□ -0.73
SCLT1-202ENST00000439369 ENSAO43768 121 aaKnown RBP10.49□□□□□ -0.73
SCLT1-202ENST00000439369 ORC5O43913 435 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 RBBP9O75884 186 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 RBP4P02753 201 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 LIPFP07098 398 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 NAT1P18440 290 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 BTN2A1Q7KYR7 527 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 HOGA1Q86XE5 327 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 Q8N402 240 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 KIR3DL3Q8N743 410 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 DTX3Q8N9I9 347 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 NUDCD2Q8WVJ2 157 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 DEDD2Q8WXF8 326 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 H1FXQ92522 213 aaKnown RBP10.49□□□□□ -0.73
SCLT1-202ENST00000439369 DYRK2Q92630 601 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 LINC00574Q9H8X3 128 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 Q9N2K0 584 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 IFT46Q9NQC8 304 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 KCNIP1Q9NZI2 227 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 ELF5Q9UKW6 265 aaPredicted RBP10.49□□□□□ -0.73
SCLT1-202ENST00000439369 TRAPPC2LQ9UL33 140 aa10.49□□□□□ -0.73
SCLT1-202ENST00000439369 RBMX2Q9Y388 322 aaKnown RBP10.49□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF729A6NN14 1252 aaPredicted RBP10.48□□□□□ -0.73
SCLT1-202ENST00000439369 B4DSR2 109 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 CGB3P0DN86 165 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 CGB7P0DN87 165 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 TBPP20226 339 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 SEC61A1P61619 476 aaKnown RBP10.48□□□□□ -0.73
SCLT1-202ENST00000439369 PAX2Q02962 417 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 TMEM200BQ69YZ2 307 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 C1orf122Q6ZSJ8 110 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 OR10A7Q8NGE5 316 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 OR52I2Q8NH67 350 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 DACT3Q96B18 629 aaPredicted RBP10.48□□□□□ -0.73
SCLT1-202ENST00000439369 HDHD3Q9BSH5 251 aaPredicted RBP10.48□□□□□ -0.73
SCLT1-202ENST00000439369 GAL3ST2Q9H3Q3 398 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF286AQ9HBT8 521 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 C19orf12Q9NSK7 152 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 POLQO75417 2590 aa10.48□□□□□ -0.73
SCLT1-202ENST00000439369 TACC2O95359 2948 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 TRAV20A0A0B4J274 112 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 hCG_1809904A0A1W2PP81 198 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 A0A1W2PPE2 198 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 A0A1W2PR64 198 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 A0A1W2PRV1 198 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 MEIOCA2RUB1 952 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 TRDCB7Z8K6 153 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 PHF1O43189 567 aaPredicted RBP10.47□□□□□ -0.73
SCLT1-202ENST00000439369 CTXN2P0C2S0 81 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 GSTT2BP0CG30 244 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 PPIAL4GP0DN37 164 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 PTHLHP12272 177 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 GATA3P23771 443 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 GZMKP49863 264 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 AP3S2P59780 193 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 HLA-DRB3P79483 266 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 DGCR2P98153 550 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 GUCA2AQ02747 115 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms