RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 RSU1Q15404 277 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 LTC4SQ16873 150 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 BAIAP2L2Q6UXY1 529 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 SATL1Q86VE3 508 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 SERPINA12Q8IW75 414 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 FOXRED2Q8IWF2 684 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 HAVCR2Q8TDQ0 301 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 CHPT1Q8WUD6 406 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 CORO2AQ92828 525 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 COQ2Q96H96 371 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 RHOVQ96L33 236 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 NR1H4Q96RI1 486 aaPredicted RBP6.18□□□□□ -1.42
VPS50-204ENST00000438395 CALYQ9NYX4 217 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 KIF25Q9UIL4 384 aa6.18□□□□□ -1.42
VPS50-204ENST00000438395 IGKV1-12A0A0C4DH73 117 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 K7EIL1 84 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 IL1AP01583 271 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 IGKV1D-12P01611 117 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 SNRNP70P08621 437 aaKnown RBP6.17□□□□□ -1.42
VPS50-204ENST00000438395 LMO1P25800 156 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 IL3RAP26951 378 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 HOXD3P31249 432 aaPredicted RBP6.17□□□□□ -1.42
VPS50-204ENST00000438395 KCNJ3P48549 501 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 GNG10P50151 68 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 RAB7AP51149 207 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 GBX2P52951 348 aaPredicted RBP6.17□□□□□ -1.42
VPS50-204ENST00000438395 RAB25P57735 213 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 NANOS3P60323 173 aaKnown RBP6.17□□□□□ -1.42
VPS50-204ENST00000438395 SNRPGP62308 76 aaKnown RBP6.17□□□□□ -1.42
VPS50-204ENST00000438395 PPP3R1P63098 170 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 ALKBH1Q13686 389 aaKnown RBP6.17□□□□□ -1.42
VPS50-204ENST00000438395 HNF4GQ14541 408 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 KISS1Q15726 138 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 ZSCAN26Q16670 478 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 TCTEX1D4Q5JR98 221 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 ZNF691Q5VV52 312 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 SLC35E3Q7Z769 313 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 ZNF329Q86UD4 541 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 OR8H3Q8N146 312 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 SYS1Q8N2H4 156 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 COMMD1Q8N668 190 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 DRAM1Q8N682 238 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 KLHL30-AS1Q8NEE0 82 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 OR51A4Q8NGJ6 313 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 OR10AC1Q8NH08 325 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 OR5AK2Q8NH90 309 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 NEK7Q8TDX7 302 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 TNFAIP8L1Q8WVP5 186 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 PELI1Q96FA3 418 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 Q96MT0 163 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 S100A13Q99584 98 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 ALG8Q9BVK2 526 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 PPIL3Q9H2H8 161 aaKnown RBP6.17□□□□□ -1.42
VPS50-204ENST00000438395 INPP5EQ9NRR6 644 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 FAM118AQ9NWS6 357 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 MYRFQ9Y2G1 1151 aa6.17□□□□□ -1.42
VPS50-204ENST00000438395 A0A087X0M5 115 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 A0A1B0GX30 115 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 SHISA3A0PJX4 238 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 TMEM30CPA0ZSE6 113 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 OR4C45A6NMZ5 311 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 NCBP2LA6PVI3 153 aaKnown RBP6.16□□□□□ -1.42
VPS50-204ENST00000438395 J3QR06 171 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 EI24O14681 340 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 HSD17B6O14756 317 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 FGF16O43320 207 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 RRP9O43818 475 aaKnown RBP6.16□□□□□ -1.42
VPS50-204ENST00000438395 MPZL2O60487 215 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 OR7C1O76099 320 aaPredicted RBP6.16□□□□□ -1.42
VPS50-204ENST00000438395 IGKV1D-33P01593 117 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 IGKV1-33P01594 117 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 IGHV3-7P01780 117 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 CSTBP04080 98 aaKnown RBP6.16□□□□□ -1.42
VPS50-204ENST00000438395 ALPLP05186 524 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 RPL23AP62750 156 aaKnown RBP6.16□□□□□ -1.42
VPS50-204ENST00000438395 GALEQ14376 348 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 IL13RA2Q14627 380 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 ZIK1Q3SY52 487 aaPredicted RBP6.16□□□□□ -1.42
VPS50-204ENST00000438395 C10orf99Q6UWK7 81 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 OR2W3Q7Z3T1 314 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 MOB3BQ86TA1 216 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 THNSL2Q86YJ6 484 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 STX19Q8N4C7 294 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 LINC00482Q8N8I6 264 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 OR51T1Q8NGJ9 327 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 OR13A1Q8NGR1 328 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 RFESDQ8TAC1 157 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 CNIH3Q8TBE1 160 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 MRGPRDQ8TDS7 321 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 LEAP2Q969E1 77 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 GON7Q9BXV9 100 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 RAB9BQ9NP90 201 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 ZFP57Q9NU63 452 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 PAK1IP1Q9NWT1 392 aaPredicted RBP6.16□□□□□ -1.42
VPS50-204ENST00000438395 FAM53CQ9NYF3 392 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 IDI2-AS1Q9NZ38 188 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 GMPPBQ9Y5P6 360 aa6.16□□□□□ -1.42
VPS50-204ENST00000438395 WI2-2373I1.2A0A1W2PRP0 233 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 LY6LH3BQJ8 138 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 AP4M1O00189 453 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms