RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	VDAC1	P21796	283 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	POLR2G	P62487	172 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF616	Q08AN1	781 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IL24	Q13007	206 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SPIN3	Q5JUX0	258 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF573	Q86YE8	665 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	LINC00518	Q8N0U6	118 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	HSD17B11	Q8NBQ5	300 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	OR5D13	Q8NGL4	314 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PLPPR1	Q8TBJ4	325 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	RXFP4	Q8TDU9	374 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PKIB	Q9C010	78 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ZNF175	Q9Y473	711 aa		13.72	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ANKRD30BL	A7E2S9	258 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ADAM20	O43506	726 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	C1QL1	O75973	258 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IL18BP	O95998	194 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	MEOX1	P50221	254 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PPT1	P50897	306 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	GNG3	P63215	75 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	C3AR1	Q16581	482 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	C20orf204	Q6ZNR8	217 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	ODF3L1	Q8IXM7	274 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	OR1K1	Q8NGR3	316 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	BCL2L2	Q92843	193 aa	Predicted RBP	13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	IP6K3	Q96PC2	410 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CABLES2	Q9BTV7	478 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	EGLN1	Q9GZT9	426 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PLEKHF2	Q9H8W4	249 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	GP6	Q9HCN6	339 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	CCL28	Q9NRJ3	127 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SMCO4	Q9NRQ5	59 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	PRSS50	Q9UI38	385 aa		13.71	□□□□□ -0.21
HLA-DQB2-231	ENST00000435145	SLC34A2	O95436	690 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CRYBA1	P05813	215 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	FOLR2	P14207	255 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	RAB13	P51153	203 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ZNF266	Q14584	549 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	AVPI1	Q5T686	147 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	TMEM252	Q8N6L7	170 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ZFP62	Q8NB50	900 aa	Predicted RBP	13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	NEK7	Q8TDX7	302 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OR51I2	Q9H344	312 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SAV1	Q9H4B6	383 aa	Predicted RBP	13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	IL17B	Q9UHF5	180 aa		13.71	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	NPIPB11	E5RHQ5	1161 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PROB1	E7EW31	1015 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	HSPB6	O14558	160 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PGLYRP1	O75594	196 aa	Predicted RBP	13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	MT-CO3	P00414	261 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	APLNR	P35414	380 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CLN3	Q13286	438 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PLA2G2C	Q5R387	149 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	MCEMP1	Q8IX19	187 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	FAM58A	Q8N1B3	248 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	LFNG	Q8NES3	379 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ZNF488	Q96MN9	340 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SLC25A31	Q9H0C2	315 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	LIPG	Q9Y5X9	500 aa		13.7	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	KLRC4-KLRK1	H3BQV0	150 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	TMEM50A	O95807	157 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SP9	P0CG40	484 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	HLA-DRB3	P79483	266 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	HIKESHI	Q53FT3	197 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CMTM1	Q8IZ96	169 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	DEFB123	Q8N688	67 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SUMF1	Q8NBK3	374 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	TMEM171	Q8WVE6	324 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	GPHA2	Q96T91	129 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	GLRX2	Q9NS18	164 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	DLL3	Q9NYJ7	618 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OR2W1	Q9Y3N9	320 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	AHCTF1	Q8WYP5	2266 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	HSD17B6	O14756	317 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SSSCA1	O60232	199 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PRH1	P02810	166 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	HOXA1	P49639	335 aa	Predicted RBP	13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ASCL1	P50553	236 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SLC10A1	Q14973	349 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	FBXW9	Q5XUX1	488 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SP5	Q6BEB4	398 aa	Predicted RBP	13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	C15orf54	Q8N8G6	183 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OR8G5	Q8NG78	346 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	LOXL4	Q96JB6	756 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	RNF115	Q9Y4L5	304 aa		13.69	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	UMAD1	C9J7I0	102 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145		J3QT63	122 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CDX4	O14627	284 aa	Predicted RBP	13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	F2R	P25116	425 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ATP6V0C	P27449	155 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	BAX	Q07812	192 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145		Q6P435	159 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ETV3L	Q6ZN32	361 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	WDYHV1	Q96HA8	205 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	TAAR3P	Q9P1P4	343 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145		J3QW42	95 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms