RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 CCDC121Q6ZUS5 278 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 CENPVQ7Z7K6 275 aaPredicted RBP7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 Q8NFD4 153 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 PXT1Q8NFP0 134 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 OR13A1Q8NGR1 328 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 OR9G1Q8NH87 305 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 OR5AK2Q8NH90 309 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 CNIH3Q8TBE1 160 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 CAPSLQ8WWF8 208 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 RGP1Q92546 391 aaPredicted RBP7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 STMN2Q93045 179 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 MYDGFQ969H8 173 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 PDCD1LG2Q9BQ51 273 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 PCDHB16Q9NRJ7 776 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 MRPS18AQ9NVS2 196 aaKnown RBP7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 CALYQ9NYX4 217 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 KIF25Q9UIL4 384 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 DHDHQ9UQ10 334 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 ZNF281Q9Y2X9 895 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 GMPPBQ9Y5P6 360 aa7.48□□□□□ -1.21
CDC42-IT1-201ENST00000431803 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 MEIKINA0A087WXM9 373 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 A0A1W2PPI3 338 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 TCRBV4S1A1TA0A5B7 111 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 SH2D7A6NKC9 451 aaPredicted RBP7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 NPIPB11E5RHQ5 1161 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 J3QR06 171 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 GABRPO00591 440 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 HSPB6O14558 160 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 MPZL2O60487 215 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 IL1AP01583 271 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 FAM106CPP0CH98 169 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 RAB3AP20336 220 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 GLP1RP43220 463 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 RBM39Q14498 530 aaKnown RBP7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 IL13RA2Q14627 380 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 ZSCAN26Q16670 478 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 PAN3Q58A45 887 aaKnown RBP7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 RSBN1Q5VWQ0 802 aaPredicted RBP7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 LPCAT4Q643R3 524 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 ASCL4Q6XD76 172 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 THNSL2Q86YJ6 484 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 OSR2Q8N2R0 312 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 ZNF565Q8N9K5 539 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 OR4X2Q8NGF9 303 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 OR51A2Q8NGJ7 313 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 OR52I1Q8NGK6 324 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 HAVCR2Q8TDQ0 301 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 TSEN15Q8WW01 171 aaKnown RBP7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 APH1BQ8WW43 257 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 CPNE2Q96FN4 548 aaPredicted RBP7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 Q96MT0 163 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 JAM3Q9BX67 310 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 AMBNQ9NP70 447 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 ING3Q9NXR8 418 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 MOB4Q9Y3A3 225 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 AMMECR1Q9Y4X0 333 aaPredicted RBP7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 HSPE1-MOB4S4R3N1 261 aa7.47□□□□□ -1.21
CDC42-IT1-201ENST00000431803 PF4P02776 101 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 LIMS3P0CW19 117 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 LIMS4P0CW20 117 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 NFYBP25208 207 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 C21orf33P30042 268 aaPredicted RBP7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SSTR5P35346 364 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 KCNJ3P48549 501 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GBX2P52951 348 aaPredicted RBP7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SLC35A2P78381 396 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 MADCAM1Q13477 382 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 PIGYQ3MUY2 71 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 NHLRC3Q5JS37 347 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 XAF1Q6GPH4 301 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SLC16A12Q6ZSM3 486 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 OR56B4Q8NH76 319 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 PLPPR1Q8TBJ4 325 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 TNFAIP8L1Q8WVP5 186 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 LEAP2Q969E1 77 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 TOMM40LQ969M1 308 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RPEQ96AT9 228 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 NR1H4Q96RI1 486 aaPredicted RBP7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SLC29A1Q99808 456 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 C9orf16Q9BUW7 83 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 BARHL1Q9BZE3 327 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 IFT22Q9H7X7 185 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 TAS2R4Q9NYW5 299 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 IDI2-AS1Q9NZ38 188 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ZNF581Q9P0T4 197 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 PSG11Q9UQ72 335 aa7.46□□□□□ -1.22
CDC42-IT1-201ENST00000431803 LOC100130705A0A1B0GUX0 176 aa7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 FGF16O43320 207 aa7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 DUS4LO95620 317 aaKnown RBP7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 IGHV3-7P01780 117 aa7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SNRNP70P08621 437 aaKnown RBP7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SOX2P48431 317 aa7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RAB7AP51149 207 aa7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GTF2A1P52655 376 aaPredicted RBP7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 EGFEM1PQ0D2K5 195 aa7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 DIAPH2-AS1Q14236 149 aa7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RSU1Q15404 277 aa7.45□□□□□ -1.22
CDC42-IT1-201ENST00000431803 CCDC58Q4VC31 144 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms