RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TRAV8-6A0A0B4J262 113 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGHV1-3A0A0C4DH29 117 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGKV1-6A0A0C4DH72 117 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 TMEM150BA6NC51 233 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF233A6NK53 670 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 GOLGA8JA6NMD2 632 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 SEC14L6B5MCN3 397 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 H7C2Y5 167 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 MAGEB4O15481 346 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 NEMFO60524 1076 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 TPM1P09493 284 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 IL1RNP18510 177 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 CCNOP22674 350 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 PRSS3P35030 304 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 CCR2P41597 374 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 CMC4P56277 68 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 MTPNP58546 118 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 TRDNQ13061 729 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGFBP7Q16270 282 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 KRTAP13-3Q3SY46 172 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 SP6Q3SY56 376 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 CDNFQ49AH0 187 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 COX19Q49B96 90 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 KRTAP13-2Q52LG2 175 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 RBM45Q8IUH3 476 aaKnown RBP1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 GAPTQ8N292 157 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF709Q8N972 641 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 ST20-AS1Q8NBB2 130 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 CYB561A3Q8NBI2 242 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR1S1Q8NH92 325 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 SFXN5Q8TD22 340 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 SNF8Q96H20 258 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR10C1Q96KK4 312 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 CATSPER2Q96P56 530 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 ALS2CR12Q96Q35 445 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 HINT2Q9BX68 163 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 ULBP2Q9BZM5 246 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 SHCBP1LQ9BZQ2 653 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 C21orf62Q9NYP8 219 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 FARSAQ9Y285 508 aaKnown RBP1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 AP3M1Q9Y2T2 418 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 CFAP46Q8IYW2 2715 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 ITPR3Q14573 2671 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 FBN3Q75N90 2809 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 MIA3Q5JRA6 1907 aa1.76□□□□□ -2.13
HMGB1P27-201ENST00000431429 APC2O95996 2303 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 COL6A6A6NMZ7 2263 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 AHCTF1Q8WYP5 2266 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 SIPA1L1O43166 1804 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 F5P12259 2224 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 SDK1Q7Z5N4 2213 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGLV3-12A0A075B6K2 115 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 FAM240AA0A1B0GVK7 77 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 TMEM72A0PK05 275 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 K7EQS6 105 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 M0QX08 132 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 MYL12BO14950 172 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 GATBO75879 557 aaKnown RBP1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 CYB5R3P00387 301 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 CST4P01036 141 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGKV1-39P01597 117 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGKV1D-39P04432 117 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 GP1BAP07359 652 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 LIPCP11150 499 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 NTF3P20783 257 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 NPY1RP25929 384 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 PSMB5P28074 263 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 RGS6P49758 472 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 C2orf80Q0P641 193 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 LAMTOR4Q0VGL1 99 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 CEACAM16Q2WEN9 425 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 TTC32Q5I0X7 151 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 MORN3Q6PF18 240 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 SPNS3Q6ZMD2 512 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 NT5DC3Q86UY8 548 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 TMEM25Q86YD3 366 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 RNF10Q8N5U6 811 aaKnown RBP1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 DEFB119Q8N690 84 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR2Y1Q8NGV0 311 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR52N1Q8NH53 320 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 NT5CQ8TCD5 201 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 C2orf15Q8WU43 125 aaKnown RBP1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 CDKL2Q92772 493 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 TNFRSF14Q92956 283 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 OTUB2Q96DC9 234 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 MRPL48Q96GC5 212 aaKnown RBP1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 IP6K3Q96PC2 410 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 RNF157Q96PX1 679 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 PDCD1LG2Q9BQ51 273 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 RHOXF2Q9BQY4 288 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 UTP23Q9BRU9 249 aaKnown RBP1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 C6orf50Q9HD87 102 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 CYB5R1Q9UHQ9 305 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 STK38LQ9Y2H1 464 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 MCM3APO60318 1980 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 SHROOM3Q8TF72 1996 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZFHX3Q15911 3703 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 MYH1P12882 1939 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 LAMA1P25391 3075 aa1.75□□□□□ -2.13
HMGB1P27-201ENST00000431429 POLQO75417 2590 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms