RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 GALNT11Q8NCW6 608 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 DMBX1Q8NFW5 382 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 OR52M1Q8NGK5 317 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 LILRB1Q8NHL6 650 aaPredicted RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 RNF141Q8WVD5 230 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 RDH5Q92781 318 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 ADAT1Q9BUB4 502 aaKnown RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 FBXL17Q9UF56 701 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 FBXO9Q9UK97 447 aaPredicted RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 GTF3C1Q12789 2109 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 CLEC18AA5D8T8 446 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 TMEM210A6NLX4 147 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 E5RGE8 158 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 SLC33A1O00400 549 aaPredicted RBP11.83□□□□□ -0.52
HOXC4-202ENST00000430889 HS3ST1O14792 307 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 CDS2O95674 445 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 GLI4P10075 376 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 CEACAM1P13688 526 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 UCP1P25874 307 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 MDH2P40926 338 aaKnown RBP11.83□□□□□ -0.52
HOXC4-202ENST00000430889 NOVA1P51513 510 aaKnown RBP11.83□□□□□ -0.52
HOXC4-202ENST00000430889 SMCO1Q147U7 214 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 ZNF169Q14929 603 aaPredicted RBP11.83□□□□□ -0.52
HOXC4-202ENST00000430889 UQCC3Q6UW78 93 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 ZNF497Q6ZNH5 498 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 FOXRED2Q8IWF2 684 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 CNEP1R1Q8N9A8 125 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 CLEC18CQ8NCF0 446 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 OR1J1Q8NGS3 322 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
HOXC4-202ENST00000430889 NEK7Q8TDX7 302 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 SECTM1Q8WVN6 248 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 MARC2Q969Z3 335 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 SMIM8Q96KF7 97 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 LRFN3Q9BTN0 628 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 POLDIP2Q9Y2S7 368 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 NSG2Q9Y328 171 aa11.83□□□□□ -0.52
HOXC4-202ENST00000430889 SPENQ96T58 3664 aaKnown RBP11.83□□□□□ -0.52
HOXC4-202ENST00000430889 ZNF292O60281 2723 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 A0A1B0GWJ7 208 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 DUXBA0A1W2PPF3 345 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 MBD3L4A6NDZ8 208 aaPredicted RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 MBD3L3A6NE82 208 aaPredicted RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 MBD3L5A6NJ08 208 aaPredicted RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 DEGS1O15121 323 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 MLNRO43193 412 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 RCC1P18754 421 aaPredicted RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 EIF5AP63241 154 aaKnown RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 MOB1BQ7L9L4 216 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 C11orf53Q8IXP5 236 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 SELENOHQ8IZQ5 122 aaKnown RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 MBD3L2Q8NHZ7 208 aaPredicted RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 ERGIC1Q969X5 290 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 STARD4Q96DR4 205 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 BSCL2Q96G97 398 aaPredicted RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 TLNRD1Q9H1K6 362 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 ZNF71Q9NQZ8 489 aaPredicted RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 ZFP57Q9NU63 452 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 TAS2R3Q9NYW6 316 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 LPAR3Q9UBY5 353 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 RCL1Q9Y2P8 373 aaKnown RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 TMA7Q9Y2S6 64 aaKnown RBP11.82□□□□□ -0.52
HOXC4-202ENST00000430889 POMT1Q9Y6A1 747 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 PRR14LQ5THK1 2151 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 ARID1AO14497 2285 aa11.82□□□□□ -0.52
HOXC4-202ENST00000430889 H0YL77 283 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.81□□□□□ -0.52
HOXC4-202ENST00000430889 WDR1O75083 606 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 OR2H2O95918 312 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 CECR9P0C854 216 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 KITLGP21583 273 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 TUBG1P23258 451 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 NBL1P41271 181 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 P2RY1P47900 373 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 TMEM33P57088 247 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 UBAC2Q8NBM4 344 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 BPIFCQ8NFQ6 507 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 SAT2Q96F10 170 aaPredicted RBP11.81□□□□□ -0.52
HOXC4-202ENST00000430889 OBP2BQ9NPH6 170 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 TUBG2Q9NRH3 451 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 CCL28Q9NRJ3 127 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 MBNL3Q9NUK0 354 aaKnown RBP11.81□□□□□ -0.52
HOXC4-202ENST00000430889 ASF1BQ9NVP2 202 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 PURGQ9UJV8 347 aaKnown RBP11.81□□□□□ -0.52
HOXC4-202ENST00000430889 URB1O60287 2271 aaKnown RBP11.81□□□□□ -0.52
HOXC4-202ENST00000430889 NKX2-6A6NCS4 301 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 NUDT19A8MXV4 375 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 GPR137BO60478 399 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 AGFG2O95081 481 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 SPIN3Q5JUX0 258 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 Q6ZS92 163 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 CXorf67Q86X51 503 aaPredicted RBP11.81□□□□□ -0.52
HOXC4-202ENST00000430889 ZADH2Q8N4Q0 377 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 FAM169BQ8N8A8 192 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 ZNF565Q8N9K5 539 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms