RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CMTM4Q8IZR5 234 aa13.81□□□□□ -0.2
UBE3D-204ENST00000430071 OR8H2Q8N162 312 aa13.81□□□□□ -0.2
UBE3D-204ENST00000430071 C11orf42Q8N5U0 333 aa13.81□□□□□ -0.2
UBE3D-204ENST00000430071 CHST4Q8NCG5 386 aa13.81□□□□□ -0.2
UBE3D-204ENST00000430071 KCNG3Q8TAE7 436 aa13.81□□□□□ -0.2
UBE3D-204ENST00000430071 SSMEM1Q8WWF3 244 aa13.81□□□□□ -0.2
UBE3D-204ENST00000430071 DMRTB1Q96MA1 342 aa13.81□□□□□ -0.2
UBE3D-204ENST00000430071 PPA2Q9H2U2 334 aa13.81□□□□□ -0.2
UBE3D-204ENST00000430071 MEGF8Q7Z7M0 2845 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 OR7C1O76099 320 aaPredicted RBP13.8□□□□□ -0.2
UBE3D-204ENST00000430071 CCL3L1P16619 93 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 SAA4P35542 130 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 RPS19P39019 145 aaKnown RBP13.8□□□□□ -0.2
UBE3D-204ENST00000430071 RPS27AP62979 156 aaKnown RBP13.8□□□□□ -0.2
UBE3D-204ENST00000430071 GRK1Q15835 563 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 MPV17LQ2QL34 196 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 TMEM200BQ69YZ2 307 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 OR2W3Q7Z3T1 314 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 LINC00596Q86U02 117 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 CLVS1Q8IUQ0 354 aaPredicted RBP13.8□□□□□ -0.2
UBE3D-204ENST00000430071 TMEM86BQ8N661 226 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 CYYR1Q96J86 154 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 IFT22Q9H7X7 185 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 LIN7BQ9HAP6 207 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 ZNRD1Q9P1U0 126 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 DAPK2Q9UIK4 370 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 POMT1Q9Y6A1 747 aa13.8□□□□□ -0.2
UBE3D-204ENST00000430071 TMEM272A0A1B0GTI8 110 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 MEIOCA2RUB1 952 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 POM121CA8CG34 1229 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 M0R1W7 72 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 HSPB6O14558 160 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 IL1AP01583 271 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 ZNF273Q14593 569 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 SIGIRRQ6IA17 410 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 C1orf122Q6ZSJ8 110 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 SUMF2Q8NBJ7 301 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 NICN1Q9BSH3 213 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 TMEM59Q9BXS4 323 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 LPAR5Q9H1C0 372 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
UBE3D-204ENST00000430071 FBLN5Q9UBX5 448 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 FAM96BQ9Y3D0 163 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 MMP24Q9Y5R2 645 aa13.79□□□□□ -0.2
UBE3D-204ENST00000430071 NOTCH1P46531 2555 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 A0A0A6YYD4 124 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 MGST3O14880 152 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 CRYBA1P05813 215 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 SERPINB10P48595 397 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 UBE2E1P51965 193 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 EFNB2P52799 333 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 EDDM3AQ14507 147 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 PAN3Q58A45 887 aaKnown RBP13.78□□□□□ -0.2
UBE3D-204ENST00000430071 BRICD5Q6PL45 260 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 GDPD3Q7L5L3 318 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 TPRX1Q8N7U7 411 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 OR5D13Q8NGL4 314 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 WFDC12Q8WWY7 111 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 TM2D1Q9BX74 207 aa13.78□□□□□ -0.2
UBE3D-204ENST00000430071 METTL8Q9H825 291 aaKnown RBP13.78□□□□□ -0.2
UBE3D-204ENST00000430071 TRBV23-1A0A0A0MS06 115 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A10PA6NDY2 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A18PA6NE21 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A16PA6NEW6 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A20PA6NIJ5 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A8PA6NJQ4 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A7PA6NKC0 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A22PA8MWA6 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A12PA8MX19 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A5PA8MXJ8 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A23PA8MXZ1 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 NDUFA7O95182 113 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 PAHP00439 452 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FBP1P09467 338 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A15PP0C7V4 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A13PP0C7W8 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A14PP0C7W9 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 FAM90A24PP0C7X0 464 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 SNRPBP14678 240 aaKnown RBP13.77□□□□□ -0.21
UBE3D-204ENST00000430071 EDDM3BP56851 147 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 RPL31P62899 125 aaKnown RBP13.77□□□□□ -0.21
UBE3D-204ENST00000430071 GUCA2AQ02747 115 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 AESQ08117 197 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 ATXN7L3Q14CW9 347 aaPredicted RBP13.77□□□□□ -0.21
UBE3D-204ENST00000430071 PRR31Q5SQ13 230 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 ATAD3CQ5T2N8 411 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 OLFML2AQ68BL7 652 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 RTN4RL2Q86UN3 420 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 LINC01006Q8NI28 216 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 PPP1R35Q8TAP8 253 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 NDNFQ8TB73 568 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 PLPPR1Q8TBJ4 325 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 DYRK2Q92630 601 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 COQ2Q96H96 371 aa13.77□□□□□ -0.21
UBE3D-204ENST00000430071 DPCDQ9BVM2 203 aaPredicted RBP13.77□□□□□ -0.21
UBE3D-204ENST00000430071 CSN2P05814 226 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 GLIPR1P48060 266 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 DLX6P56179 175 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 P2RX3P56373 397 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 IDNKQ5T6J7 187 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms