RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 NF1P21359 2839 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 IGHV1-69DA0A0B4J2H0 117 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 METTL21EPA6NDL7 271 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A10PA6NDY2 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A18PA6NE21 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A16PA6NEW6 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A20PA6NIJ5 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A8PA6NJQ4 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A7PA6NKC0 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A22PA8MWA6 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A12PA8MX19 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A5PA8MXJ8 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A23PA8MXZ1 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 PAHP00439 452 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 IGHV1-69P01742 117 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 CSN2P05814 226 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A15PP0C7V4 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A13PP0C7W8 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A14PP0C7W9 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 FAM90A24PP0C7X0 464 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
SGCE-204ENST00000428696 PRTN3P24158 256 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 CDK2P24941 298 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 NFYBP25208 207 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 RPL5P46777 297 aaKnown RBP11.94□□□□□ -0.5
SGCE-204ENST00000428696 KCNJ3P48549 501 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 PRAMEF5Q5TYX0 476 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 RSBN1Q5VWQ0 802 aaPredicted RBP11.94□□□□□ -0.5
SGCE-204ENST00000428696 SIGIRRQ6IA17 410 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 SLC35E4Q6ICL7 350 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 RBMS3Q6XE24 437 aaKnown RBP11.94□□□□□ -0.5
SGCE-204ENST00000428696 C1orf122Q6ZSJ8 110 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 PRR18Q8N4B5 295 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 UBALD1Q8TB05 177 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 CYYR1Q96J86 154 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 DMRTB1Q96MA1 342 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 SLC6A7Q99884 636 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 ZFHX3Q15911 3703 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 A0A0A6YYD4 124 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 FAM172BPA6NC97 362 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 RNASEK-C17orf49H0YIS7 233 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 MT-ND4P03905 459 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 NCR3LG1Q68D85 454 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 Q6ZTK2 550 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 ANKRD13BQ86YJ7 626 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 OR56B1Q8NGI3 324 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 OR13A1Q8NGR1 328 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 ZDHHC16Q969W1 377 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 PHF21AQ96BD5 680 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 SULT4A1Q9BR01 284 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 SUCNR1Q9BXA5 334 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 FAM96BQ9Y3D0 163 aa11.93□□□□□ -0.5
SGCE-204ENST00000428696 MEIOCA2RUB1 952 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 CCDC160A6NGH7 325 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 C17orf98A8MV24 154 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 NOL3O60936 208 aaKnown RBP11.92□□□□□ -0.5
SGCE-204ENST00000428696 IL1AP01583 271 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 IGHV3-7P01780 117 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 IGHV1-8P0DP01 117 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 CHATP28329 748 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 LGALS4P56470 323 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 GUCA2AQ02747 115 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 FAM189A2Q15884 450 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 ZNF497Q6ZNH5 498 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 TCF23Q7RTU1 214 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 RTN4RL2Q86UN3 420 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 OR13D1Q8NGV5 346 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 LGALS14Q8TCE9 139 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 ZNF418Q8TF45 676 aaPredicted RBP11.92□□□□□ -0.5
SGCE-204ENST00000428696 ARL11Q969Q4 196 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 RAB3CQ96E17 227 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 ARHGAP5-AS1Q96IT6 56 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 TNFRSF19Q9NS68 423 aa11.92□□□□□ -0.5
SGCE-204ENST00000428696 RCC2Q9P258 522 aaKnown RBP11.92□□□□□ -0.5
SGCE-204ENST00000428696 JMJD1CQ15652 2540 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 NPFFO15130 113 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 LDLRAD4O15165 306 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 MMP23AO75900 390 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 CLPXO76031 633 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 FSHBP01225 129 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 GLAP06280 429 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 RAB6AP20340 208 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 GZMHP20718 246 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 DLX6P56179 175 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 MRPS15P82914 257 aaKnown RBP11.91□□□□□ -0.5
SGCE-204ENST00000428696 SRSF2Q01130 221 aaKnown RBP11.91□□□□□ -0.5
SGCE-204ENST00000428696 BAIAP2L2Q6UXY1 529 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 SLC16A12Q6ZSM3 486 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 CROCCP3Q8IVE0 287 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 C11orf42Q8N5U0 333 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 SIGLECL1Q8N7X8 197 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 CORO2AQ92828 525 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 ZMAT3Q9HA38 289 aaKnown RBP11.91□□□□□ -0.5
SGCE-204ENST00000428696 TAS2R3Q9NYW6 316 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 CALYQ9NYX4 217 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 KCNIP1Q9NZI2 227 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 FBLN5Q9UBX5 448 aa11.91□□□□□ -0.5
SGCE-204ENST00000428696 MXRA5Q9NR99 2828 aa11.9□□□□□ -0.5
SGCE-204ENST00000428696 KBTBD11-OT1A0A1B0GTJ5 212 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms