RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 CFHR1Q03591 330 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 SLC38A11Q08AI6 406 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 TMEM267Q0VDI3 215 aaPredicted RBP12.03□□□□□ -0.48
RPL28-202ENST00000426763 DOLPP1Q86YN1 238 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 SAMD10Q9BYL1 202 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 WNT5BQ9H1J7 359 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 TNFRSF19Q9NS68 423 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 NUPL2O15504 423 aaKnown RBP12.03□□□□□ -0.48
RPL28-202ENST00000426763 ZNF708P17019 499 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 C19orf57Q0VDD7 668 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 ZNF658BQ4V348 819 aaPredicted RBP12.03□□□□□ -0.48
RPL28-202ENST00000426763 CCDC144NLQ6NUI1 221 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 TMEM123Q8N131 208 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 CCL13Q99616 98 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 ZIC3O60481 467 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 CLN5O75503 358 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 ETV3LQ6ZN32 361 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 HSD17B10Q99714 261 aaKnown RBP12.03□□□□□ -0.48
RPL28-202ENST00000426763 ATPIF1Q9UII2 106 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 LSM2Q9Y333 95 aaKnown RBP12.03□□□□□ -0.48
RPL28-202ENST00000426763 LGALS7P47929 136 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 P2RX3P56373 397 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 ERVFRD-1P60508 538 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 MPPED2Q15777 294 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 GAPTQ8N292 157 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 C17orf50Q8WW18 174 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 TMEM147Q9BVK8 224 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 UMAD1C9J7I0 102 aa12.02□□□□□ -0.48
RPL28-202ENST00000426763 DBX2Q6ZNG2 339 aa12.02□□□□□ -0.48
RPL28-202ENST00000426763 DHRS7CA6NNS2 312 aa12.02□□□□□ -0.48
RPL28-202ENST00000426763 J3QW42 95 aa12.02□□□□□ -0.48
RPL28-202ENST00000426763 NDUFA2O43678 99 aa12.02□□□□□ -0.48
RPL28-202ENST00000426763 RAB4AP20338 218 aa12.02□□□□□ -0.48
RPL28-202ENST00000426763 USF2Q15853 346 aaPredicted RBP12.02□□□□□ -0.48
RPL28-202ENST00000426763 KLF14Q8TD94 323 aaPredicted RBP12.02□□□□□ -0.48
RPL28-202ENST00000426763 MIXL1Q9H2W2 232 aa12.02□□□□□ -0.48
RPL28-202ENST00000426763 SAV1Q9H4B6 383 aaPredicted RBP12.02□□□□□ -0.48
RPL28-202ENST00000426763 CCL28Q9NRJ3 127 aa12.02□□□□□ -0.48
RPL28-202ENST00000426763 A0A0G2JMM0 328 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 A0A1W2PPB8 328 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 A0A1W2PRS3 328 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 KIR3DP1A8MWS1 328 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 ZNF714Q96N38 554 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 PCGF1Q9BSM1 259 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 PKIBQ9C010 78 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 FAM206AQ9NX38 181 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 IL19Q9UHD0 177 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 TRAV39A0A0B4J263 110 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 GOSR1O95249 250 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 CD37P11049 281 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 FAM209AQ5JX71 171 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 TIMM23BQ5SRD1 257 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 ST8SIA2Q92186 375 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 FLYWCH2Q96CP2 140 aaKnown RBP12.02□□□□□ -0.49
RPL28-202ENST00000426763 SLC25A4P12235 298 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 SNAI3Q3KNW1 292 aa12.02□□□□□ -0.49
RPL28-202ENST00000426763 ZNHIT1O43257 154 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 RAB32Q13637 225 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 HOGA1Q86XE5 327 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 ZNF596Q8TC21 504 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 BARX1Q9HBU1 254 aaPredicted RBP12.01□□□□□ -0.49
RPL28-202ENST00000426763 V9GYH0 126 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 OPN1MWP04001 364 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 OPN1MW2P0DN77 364 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 OPN1MW3P0DN78 364 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 EFNB2P52799 333 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 DYRK2Q92630 601 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 MARS2Q96GW9 593 aaKnown RBP12.01□□□□□ -0.49
RPL28-202ENST00000426763 GRAMD2BQ96HH9 432 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 GPR137Q96N19 417 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 AP1S3Q96PC3 154 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 MARVELD1Q9BSK0 173 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 AKR1C3P42330 323 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 FBP1P09467 338 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 SPACA3Q8IXA5 215 aa12.01□□□□□ -0.49
RPL28-202ENST00000426763 SF3B6Q9Y3B4 125 aaKnown RBP12.01□□□□□ -0.49
RPL28-202ENST00000426763 VWA8A3KMH1 1905 aa12□□□□□ -0.49
RPL28-202ENST00000426763 RAB19A4D1S5 217 aa12□□□□□ -0.49
RPL28-202ENST00000426763 SYNGR3O43761 229 aa12□□□□□ -0.49
RPL28-202ENST00000426763 DAOP14920 347 aa12□□□□□ -0.49
RPL28-202ENST00000426763 AVPI1Q5T686 147 aa12□□□□□ -0.49
RPL28-202ENST00000426763 LIAT1Q6ZQX7 453 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM131CQ96AQ9 280 aa12□□□□□ -0.49
RPL28-202ENST00000426763 SMCO4Q9NRQ5 59 aa12□□□□□ -0.49
RPL28-202ENST00000426763 CST4P01036 141 aa12□□□□□ -0.49
RPL28-202ENST00000426763 CD200P41217 278 aa12□□□□□ -0.49
RPL28-202ENST00000426763 SPINK9Q5DT21 86 aa12□□□□□ -0.49
RPL28-202ENST00000426763 SLC25A53Q5H9E4 307 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM122BQ7Z309 247 aa12□□□□□ -0.49
RPL28-202ENST00000426763 DPF1Q92782 380 aa12□□□□□ -0.49
RPL28-202ENST00000426763 PIMREGQ9BSJ6 248 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A10PA6NDY2 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A18PA6NE21 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A16PA6NEW6 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A20PA6NIJ5 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A7PA6NKC0 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 ZNF727A8MUV8 499 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms