RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CCL3P10147 92 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 NOVA1P51513 510 aaKnown RBP13.07□□□□□ -0.32
C9orf3-204ENST00000424143 NDUFA6P56556 154 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 MLF1P58340 268 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 SSTP61278 116 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 SERF2P84101 59 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 ZNF880Q6PDB4 577 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 AAED1Q7RTV5 226 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 HIST3H2BBQ8N257 126 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 ZNF611Q8N823 705 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 OR2V1Q8NHB1 315 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 FOXB1Q99853 325 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 CRLF2Q9HC73 371 aa13.07□□□□□ -0.32
C9orf3-204ENST00000424143 IGHV3-15A0A0B4J1V0 119 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 LY6G6EA0A0G2JKS1 128 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 FAM221AA4D161 298 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 KIAA1324LA8MWY0 1029 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-204ENST00000424143 H0YL77 283 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 CLDN34H7C241 214 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 TNFSF11O14788 317 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 CHST1O43916 411 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 OPN1MWP04001 364 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 OPN1MW2P0DN77 364 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 OPN1MW3P0DN78 364 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 COX6A1P12074 109 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 ERVFRD-1P60508 538 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 CCL7P80098 99 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 ZNF818PQ6ZRF7 136 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 C1orf87Q8N0U7 546 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 GAPTQ8N292 157 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 PIGCQ92535 297 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 ADGRG7Q96K78 797 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 AGMATQ9BSE5 352 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 U3KQA8 63 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 TNRC6BQ9UPQ9 1833 aaKnown RBP13.06□□□□□ -0.32
C9orf3-204ENST00000424143 ZNF727A8MUV8 499 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 PHOX2AO14813 284 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 OR7C1O76099 320 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-204ENST00000424143 BCL2P10415 239 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 MYF5P13349 255 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 PAX1P15863 534 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 CARD18P57730 90 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 NKX6-1P78426 367 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-204ENST00000424143 FAM90A2PQ658T7 463 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 MKXQ8IYA7 352 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 SPEM1Q8N4L4 309 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 SLAMF9Q96A28 289 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 PINX1Q96BK5 328 aaKnown RBP13.06□□□□□ -0.32
C9orf3-204ENST00000424143 FAM210BQ96KR6 192 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 CCDC74BQ96LY2 380 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 PFDN5Q99471 154 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
C9orf3-204ENST00000424143 LINC00470Q9BZP3 86 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 CALHM2Q9HA72 323 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 GPR35Q9HC97 309 aa13.06□□□□□ -0.32
C9orf3-204ENST00000424143 EML6Q6ZMW3 1958 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 TNRC6AQ8NDV7 1962 aaKnown RBP13.05□□□□□ -0.32
C9orf3-204ENST00000424143 PGLYRP1O75594 196 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-204ENST00000424143 ZNF205O95201 554 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 F2RP25116 425 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 EPHA8P29322 1005 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-204ENST00000424143 CD200P41217 278 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 SLC25A26Q70HW3 274 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 GGNQ86UU5 652 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 RPS19BP1Q86WX3 136 aaKnown RBP13.05□□□□□ -0.32
C9orf3-204ENST00000424143 CALHM1Q8IU99 346 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 NAT6Q93015 286 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 PYGO2Q9BRQ0 406 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 CABLES2Q9BTV7 478 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 PHF7Q9BWX1 381 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-204ENST00000424143 STRADBQ9C0K7 418 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 SDF2L1Q9HCN8 221 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 GFOD1Q9NXC2 390 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 TAAR3PQ9P1P4 343 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 ARID1AO14497 2285 aa13.05□□□□□ -0.32
C9orf3-204ENST00000424143 MKI67P46013 3256 aaKnown RBP13.05□□□□□ -0.32
C9orf3-204ENST00000424143 OR5H1A6NKK0 313 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 IGHEP01854 428 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 UMODP07911 640 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 GLI4P10075 376 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 EDN3P14138 238 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 EPHA1P21709 976 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 DEFA6Q01524 100 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 CENPVQ7Z7K6 275 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-204ENST00000424143 MRGPRGQ86SM5 289 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 OR5R1Q8NH85 324 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 PRDM13Q9H4Q3 707 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 P4HTMQ9NXG6 502 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 PITPNC1Q9UKF7 332 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 TIMM9Q9Y5J7 89 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 HS3ST3B1Q9Y662 390 aa13.04□□□□□ -0.32
C9orf3-204ENST00000424143 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 CYTIPO60759 359 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 CST7O76096 145 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 IFNA1P01562 189 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 OMGP23515 440 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 NTF4P34130 210 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 ASCL1P50553 236 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms