RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 BAGE3Q86Y29 109 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 BAGE2Q86Y30 109 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 TM2D1Q9BX74 207 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 FBP1P09467 338 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 RAB5AP20339 215 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 CSN1S1P47710 185 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 GAS1P54826 345 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 RPS11P62280 158 aaKnown RBP eCLIP12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 TIPARPQ7Z3E1 657 aaKnown RBP12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 V9GYS6 101 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 CRYM-AS1A6NIL9 109 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 SPRY3O43610 288 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 HLA-GP17693 338 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 SULT1A2P50226 295 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 ZNF83P51522 516 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 RHOBP62745 196 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 DMRTC1Q5HYR2 192 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 TMEM251Q8N6I4 163 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 PSG11Q9UQ72 335 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 PATE3B3GLJ2 98 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 KLK10O43240 276 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 COX19Q49B96 90 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 FFAR4Q5NUL3 377 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 DEFB108BQ8NET1 73 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 Q9N2K0 584 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 R4GN57 208 aa12.88□□□□□ -0.35
AP000550.1-201ENST00000420508 DEDDO75618 318 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 IFITM2Q01629 132 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 ZNF90Q03938 601 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 PIGYQ3MUY2 71 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 RPUSD4Q96CM3 377 aaKnown RBP12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 IL36GQ9NZH8 169 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 CHCHD2Q9Y6H1 151 aaPredicted RBP12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 FAM90A26D6RGX4 464 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 NPIPB7O75200 414 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 IGFBP3P17936 291 aaPredicted RBP12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 POLR2GP62487 172 aaKnown RBP eCLIP12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 TMEM241Q24JQ0 296 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 Q3ZCU0 254 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 RGP1Q92546 391 aaPredicted RBP12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 LINC00052Q96N35 136 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 NPTNQ9Y639 398 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 NMBP08949 121 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 SPP1P10451 314 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 MOGAT2Q3SYC2 334 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 CTDSP1Q9GZU7 261 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 SCO1O75880 301 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 F2RP25116 425 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 SERF2P84101 59 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 MRPL14Q6P1L8 145 aaKnown RBP12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 MDP1Q86V88 176 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 TMEM18Q96B42 140 aa12.87□□□□□ -0.35
AP000550.1-201ENST00000420508 H3BP45 60 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 OPN1MWP04001 364 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 OPN1MW2P0DN77 364 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 OPN1MW3P0DN78 364 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 FAM214BQ7L5A3 538 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 WNT2BQ93097 391 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 SLC7A10Q9NS82 523 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 MTCH1Q9NZJ7 389 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 RNF7Q9UBF6 113 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 FCGR3BO75015 233 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 SCGB1D1O95968 90 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 MGST1P10620 155 aaKnown RBP12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 MPZP25189 248 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 AKR1C3P42330 323 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 DYNLT3P51808 116 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 PDCD1Q15116 288 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 ZNF362Q5T0B9 420 aaPredicted RBP12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 ZNF66Q6ZN08 573 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 TMEM222Q9H0R3 208 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 CCL28Q9NRJ3 127 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 PRR33A8MZF0 331 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 COX7A2P2O60397 106 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 CDC34P49427 236 aaPredicted RBP12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 CNN1P51911 297 aaKnown RBP12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 TMEM50BP56557 158 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 TMEM267Q0VDI3 215 aaPredicted RBP12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 ETV3LQ6ZN32 361 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 UBAC2Q8NBM4 344 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 SLC25A40Q8TBP6 338 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 URGCP-MRPS24S4R325 110 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 IFNL4K9M1U5 179 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 GABRA4P48169 554 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 KRTCAP3Q53RY4 240 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 GBF1Q92538 1859 aa12.86□□□□□ -0.35
AP000550.1-201ENST00000420508 A0A1W2PN81 502 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 XKRY2A2RUG3 117 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 CHST1O43916 411 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 CHRNA7P36544 502 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 PRRX1P54821 245 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 OR1L4Q8NGR5 311 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 PRNDQ9UKY0 176 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 OR7C2O60412 319 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 CCL2P13500 99 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 ZNF660Q6AZW8 331 aaPredicted RBP12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
AP000550.1-201ENST00000420508 OR1K1Q8NGR3 316 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms