RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 HHLA2Q9UM44 414 aa6.84□□□□□ -1.31
SIK3-203ENST00000415541 LOXL2Q9Y4K0 774 aa6.84□□□□□ -1.31
SIK3-203ENST00000415541 USP34Q70CQ2 3546 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ARID1AO14497 2285 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 TMED7-TICAM2A0A0A6YYA0 188 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 IGHV5-10-1A0A0J9YXX1 117 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 LOC102723971A0A1B0GUV8 181 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 C4orf47A7E2U8 309 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 CEACAM18A8MTB9 384 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 K7ESF4 209 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 GDF9O60383 454 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 HRASP01112 189 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 HSD11B1P28845 292 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 OGFOD3Q6PK18 319 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 KLHL24Q6TFL4 600 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 LINC00696Q6ZRV3 163 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 C16orf82Q7Z2V1 217 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 LRP11Q86VZ4 500 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 TMEM123Q8N131 208 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 CLDND2Q8NHS1 167 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ZNF596Q8TC21 504 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ASB5Q8WWX0 329 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 CLDN23Q96B33 292 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ANAPC16Q96DE5 110 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 NUDT16L1Q9BRJ7 211 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 SAMD10Q9BYL1 202 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 CST9LQ9H4G1 147 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 PATZ1Q9HBE1 687 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 SLC45A2Q9UMX9 530 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ST3GAL6Q9Y274 331 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 A6NJY4 79 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 AQP7P3A6NL99 342 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ZNF814B7Z6K7 855 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 SHISA8B8ZZ34 492 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 SLC16A7O60669 478 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 SMIM10L1P0DMW3 83 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 GNB3P16520 340 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 FSTP19883 344 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ALOX5APP20292 161 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 GLRA1P23415 457 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ATP6V0CP27449 155 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 GABRA2P47869 451 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 FGF8P55075 233 aaPredicted RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 RPS18P62269 152 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 CSNK2A1P68400 391 aaPredicted RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 ACTL10Q5JWF8 245 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 C1orf100Q5SVJ3 147 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 SPSB3Q6PJ21 355 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 PET117Q6UWS5 81 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 RPS19BP1Q86WX3 136 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 CDC20BQ86Y33 519 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 TCTEX1D1Q8N7M0 179 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 CSNK2A3Q8NEV1 391 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 VN1R17PQ8TDU5 208 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 SMIM10Q96HG1 83 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 TSSK2Q96PF2 358 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ABHD6Q9BV23 337 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 CISD1Q9NZ45 108 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 PRSS50Q9UI38 385 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 HIF3AQ9Y2N7 669 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 TRAPPC1Q9Y5R8 145 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 MRPS18BQ9Y676 258 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 A0A1W2PQM1 296 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 BPNT1O95861 308 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 DDAH2O95865 285 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ABHD16AO95870 558 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 PFN1P07737 140 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 H2BFMP0C1H6 154 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 ARR3P36575 388 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 SRP14P37108 136 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 RPS27P42677 84 aaKnown RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 POU3F1Q03052 451 aaPredicted RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 SQSTM1Q13501 440 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 BSXQ3C1V8 233 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 STPG4Q8N801 248 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 OR10S1Q8NGN2 331 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 OR2AJ1Q8NGZ0 328 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 BCL2L2Q92843 193 aaPredicted RBP6.83□□□□□ -1.32
SIK3-203ENST00000415541 REEP6Q96HR9 211 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 VSTM2LQ96N03 204 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 WFDC1Q9HC57 220 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 SLC2A9Q9NRM0 540 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 OR6C3Q9NZP0 311 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 CDC42EP3Q9UKI2 254 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 PILRBQ9UKJ0 227 aa6.83□□□□□ -1.32
SIK3-203ENST00000415541 DUSP1P28562 367 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 EFNA3P52797 238 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 SUPT4H1P63272 117 aaKnown RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 C17orf67Q0P5P2 114 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 MRPL49Q13405 166 aaKnown RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 ARL6IP1Q15041 203 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 RHBDD2Q6NTF9 364 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 FDX2Q6P4F2 183 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 COX15Q7KZN9 410 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 BOD1Q96IK1 185 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 ZNF586Q9NXT0 402 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 MUC6Q6W4X9 2439 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 KIF26AQ9ULI4 1882 aaPredicted RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 ZFP92A6NM28 416 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 M0QZ24 198 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms