RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ODAMA1E959 279 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 ECDO95905 644 aaPredicted RBP11.82□□□□□ -0.52
SF3B1-204ENST00000414963 GSTT2BP0CG30 244 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 RPS2P15880 293 aaKnown RBP11.82□□□□□ -0.52
SF3B1-204ENST00000414963 GLIPR1P48060 266 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 NPY4RP50391 375 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 IFITM3Q01628 133 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 MEF2CQ06413 473 aaPredicted RBP11.82□□□□□ -0.52
SF3B1-204ENST00000414963 DCTN2Q13561 401 aaKnown RBP11.82□□□□□ -0.52
SF3B1-204ENST00000414963 TRIQKQ629K1 86 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 ZNF554Q86TJ5 538 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 LYSMD2Q8IV50 215 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 GVQW1Q8N7I0 195 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 CORO2AQ92828 525 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 CHMP1AQ9HD42 196 aaPredicted RBP11.82□□□□□ -0.52
SF3B1-204ENST00000414963 IFT46Q9NQC8 304 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 KIF25Q9UIL4 384 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 PCDHB10Q9UN67 800 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 ARID1AO14497 2285 aa11.82□□□□□ -0.52
SF3B1-204ENST00000414963 ANKRD17O75179 2603 aaKnown RBP11.81□□□□□ -0.52
SF3B1-204ENST00000414963 IGHV4-30-2A0A087WSY4 118 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 MEIKINA0A087WXM9 373 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 A0A1W2PQ09 198 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 ANKRD20A5PA0PJZ0 165 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 MEIS3P1A6NDR6 274 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 IGHV2-5P01817 119 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 CSF1P09603 554 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 SLC25A16P16260 332 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 TBPP20226 339 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 AP3S2P59780 193 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 LMO4P61968 165 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 KLF9Q13886 244 aaPredicted RBP11.81□□□□□ -0.52
SF3B1-204ENST00000414963 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 RNASE12Q5GAN4 147 aaKnown RBP11.81□□□□□ -0.52
SF3B1-204ENST00000414963 WDR25Q64LD2 544 aaPredicted RBP11.81□□□□□ -0.52
SF3B1-204ENST00000414963 BEST4Q8NFU0 473 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 OR4K15Q8NH41 348 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 ZFAND2BQ8WV99 257 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 SNAPC3Q92966 411 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 ST6GALNAC5Q9BVH7 336 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 ABCB10Q9NRK6 738 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 OR6C3Q9NZP0 311 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 LPAR3Q9UBY5 353 aa11.81□□□□□ -0.52
SF3B1-204ENST00000414963 ZNF230Q9UIE0 474 aaPredicted RBP11.81□□□□□ -0.52
SF3B1-204ENST00000414963 ITPR2Q14571 2701 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 TRBV23-1A0A0A0MS06 115 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 KIR2DS1A0A191URI9 304 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 TRDCB7Z8K6 153 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 CD74P04233 296 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 CGB3P0DN86 165 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 CGB7P0DN87 165 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 NDUFB7P17568 137 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 RCC1P18754 421 aaPredicted RBP11.8□□□□□ -0.52
SF3B1-204ENST00000414963 GZMHP20718 246 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 KIR2DS4P43632 304 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 DYRK1AQ13627 763 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 EDDM3AQ14507 147 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 KIR2DS1Q14954 304 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 STEAP3Q658P3 488 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 C16orf87Q6PH81 154 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 TRAT1Q6PIZ9 186 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 TOMM5Q8N4H5 51 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 ZNF565Q8N9K5 539 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 CLDND2Q8NHS1 167 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 LINC00574Q9H8X3 128 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 ZNF286AQ9HBT8 521 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 CLN8Q9UBY8 286 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 ANXA10Q9UJ72 324 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 TRAPPC2LQ9UL33 140 aa11.8□□□□□ -0.52
SF3B1-204ENST00000414963 IGKV1D-8A0A087WSZ0 117 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 hADV38S2A0JD32 116 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 ZNF736B4DX44 427 aaPredicted RBP11.79□□□□□ -0.52
SF3B1-204ENST00000414963 DIRAS3O95661 229 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 EDDM3BP56851 147 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 TAS2R19P59542 299 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 ACTBL2Q562R1 376 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 C6orf183Q5T699 404 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 FGFRL1Q8N441 504 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 OR5AP2Q8NGF4 316 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 C8orf46Q8TAG6 207 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 CCDC107Q8WV48 283 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 RAB39BQ96DA2 213 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 DMRTB1Q96MA1 342 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 DCTN5Q9BTE1 182 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 UBE2J1Q9Y385 318 aaPredicted RBP11.79□□□□□ -0.52
SF3B1-204ENST00000414963 LINC00312Q9Y6C7 94 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 PDZD2O15018 2839 aa11.79□□□□□ -0.52
SF3B1-204ENST00000414963 TRGV10A0A0A0MS01 117 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 IGHV4-61A0A0C4DH41 118 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 A8MXK9 166 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 PLA2G10O15496 165 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 CTXN2P0C2S0 81 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 AKAIN1P0CW23 69 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 INPP1P49441 399 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 TAS2R46P59540 309 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 RPL31P62899 125 aaKnown RBP11.78□□□□□ -0.52
SF3B1-204ENST00000414963 ASAH1Q13510 395 aa11.78□□□□□ -0.52
SF3B1-204ENST00000414963 HMGN3Q15651 99 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms