RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ISXQ2M1V0 245 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 FAM166AQ6J272 317 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 MFSD12Q6NUT3 480 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 BCL6BQ8N143 479 aaPredicted RBP8.11□□□□□ -1.11
SNHG3-201ENST00000413987 ZDHHC22Q8N966 263 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 OR52R1Q8NGF1 315 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 TMED6Q8WW62 240 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 DCUN1D4Q92564 292 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 RAB39BQ96DA2 213 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 VN1R1Q9GZP7 353 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 ATG5Q9H1Y0 275 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 CACFD1Q9UGQ2 172 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 MGAQ8IWI9 3026 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 TRBV5-7A0A0A0MS05 114 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 C9orf170A2RU37 121 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF736B4DX44 427 aaPredicted RBP8.11□□□□□ -1.11
SNHG3-201ENST00000413987 G3V3Y1 287 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 PPIHO43447 177 aaKnown RBP8.11□□□□□ -1.11
SNHG3-201ENST00000413987 TGOLN2O43493 480 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 CYB5AP00167 134 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 KLK3P07288 261 aaPredicted RBP8.11□□□□□ -1.11
SNHG3-201ENST00000413987 S100A2P29034 98 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 SOX2P48431 317 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 CX3CR1P49238 355 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 RBP2P50120 134 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 NANOS3P60323 173 aaKnown RBP8.11□□□□□ -1.11
SNHG3-201ENST00000413987 ELAVL1Q15717 326 aaKnown RBP8.11□□□□□ -1.11
SNHG3-201ENST00000413987 NSDHLQ15738 373 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 SPIN3Q5JUX0 258 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF684Q5T5D7 378 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 FHL5Q5TD97 284 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 BPIFB2Q8N4F0 458 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 PAQR4Q8N4S7 273 aaPredicted RBP8.11□□□□□ -1.11
SNHG3-201ENST00000413987 EXD3Q8N9H8 876 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 OR4N2Q8NGD1 307 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 OR4D5Q8NGN0 318 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 OR4K13Q8NH42 304 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 ADAMTS17Q8TE56 1095 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 MRPL53Q96EL3 112 aaKnown RBP8.11□□□□□ -1.11
SNHG3-201ENST00000413987 KIRREL1Q96J84 757 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 NMES1Q9C002 83 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 SELENOIQ9C0D9 397 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 LAT2Q9GZY6 243 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 COMMD4Q9H0A8 199 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 CYTL1Q9NRR1 136 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 CSAG2Q9Y5P2 127 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 NPIPA5A0A0B4J1W7 369 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 CENPVL1A0A0U1RR11 272 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 MAS1P04201 325 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 HIST1H1CP16403 213 aaKnown RBP8.1□□□□□ -1.11
SNHG3-201ENST00000413987 HOXA5P20719 270 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 RPS4Y1P22090 263 aaKnown RBP8.1□□□□□ -1.11
SNHG3-201ENST00000413987 IL13RA1P78552 427 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 RAB31Q13636 194 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 OR7A5Q15622 319 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 DUSP5Q16690 384 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 BTNL3Q6UXE8 466 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 TIPARPQ7Z3E1 657 aaKnown RBP8.1□□□□□ -1.11
SNHG3-201ENST00000413987 PIP4P1Q86T03 277 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 OR51D1Q8NGF3 324 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 GPR148Q8TDV2 347 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 SEH1LQ96EE3 360 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 PCGF1Q9BSM1 259 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 CDH20Q9HBT6 801 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 FOXJ2Q9P0K8 574 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 DHDHQ9UQ10 334 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 A0A0B4J2A0 478 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 PPIAL4CA0A0B4J2A2 164 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 TMEM72A0PK05 275 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 CDC14CA4D256 554 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 MEIS3P1A6NDR6 274 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 HSPB2A8KAH6 182 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 C17orf105B2RV13 164 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 TAAR5O14804 337 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 MT-CO3P00414 261 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 IFNA2P01563 188 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 FCGR3AP08637 254 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 PPIAL4GP0DN37 164 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 GYPEP15421 78 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 RPS18P62269 152 aaKnown RBP8.1□□□□□ -1.11
SNHG3-201ENST00000413987 GAGE1Q13065 139 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 HSPB2Q16082 182 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF239Q16600 458 aaKnown RBP8.1□□□□□ -1.11
SNHG3-201ENST00000413987 HIST2H3AQ71DI3 136 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF738Q8NE65 137 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 FAM3DQ96BQ1 224 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 JSRP1Q96MG2 331 aaPredicted RBP8.1□□□□□ -1.11
SNHG3-201ENST00000413987 SDF2Q99470 211 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 OR8D2Q9GZM6 311 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 PARP11Q9NR21 331 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 SHPKQ9UHJ6 478 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 IER3IP1Q9Y5U9 82 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 ATMQ13315 3056 aa8.1□□□□□ -1.11
SNHG3-201ENST00000413987 ZZEF1O43149 2961 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 SDK2Q58EX2 2172 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 TMEM8BA6NDV4 472 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 LRRC3CA6NJW4 275 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 TMEM212A6NML5 194 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 SHISA8B8ZZ34 492 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 SLC17A2O00624 439 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms