RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 FAM90A23PA8MXZ1 464 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 CCRL2O00421 344 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 RRP9O43818 475 aaKnown RBP25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 FAM90A15PP0C7V4 464 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 FAM90A13PP0C7W8 464 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 FAM90A14PP0C7W9 464 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 FAM90A24PP0C7X0 464 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 VSIG8P0DPA2 414 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 HKR1P10072 659 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 OMGP23515 440 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 BRICD5Q6PL45 260 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 LHFPL4Q7Z7J7 247 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 OR6M1Q8NGM8 313 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 SPACA1Q9HBV2 294 aa25.3■■□□□ 1.64
TRAF3IP1-203ENST00000409739 CGB3P0DN86 165 aa25.29■■□□□ 1.64
TRAF3IP1-203ENST00000409739 CGB7P0DN87 165 aa25.29■■□□□ 1.64
TRAF3IP1-203ENST00000409739 PAX6P26367 422 aa25.29■■□□□ 1.64
TRAF3IP1-203ENST00000409739 SLC35E4Q6ICL7 350 aa25.29■■□□□ 1.64
TRAF3IP1-203ENST00000409739 OR10K2Q6IF99 312 aa25.29■■□□□ 1.64
TRAF3IP1-203ENST00000409739 NEK7Q8TDX7 302 aa25.29■■□□□ 1.64
TRAF3IP1-203ENST00000409739 CLEC7AQ9BXN2 247 aa25.29■■□□□ 1.64
TRAF3IP1-203ENST00000409739 TBL2Q9Y4P3 447 aaKnown RBP25.29■■□□□ 1.64
TRAF3IP1-203ENST00000409739 KBTBD11-OT1A0A1B0GTJ5 212 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 TRDV1A0A1B0GX56 115 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 FAM181BA6NEQ2 426 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 SLC17A2O00624 439 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 MPIG6BO95866 241 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 COMPP49747 757 aaPredicted RBP25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 DYNC1I2Q13409 638 aaKnown RBP25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 LDLRAD2Q5SZI1 272 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 SIGIRRQ6IA17 410 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 ZNF565Q8N9K5 539 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 MRGPRDQ8TDS7 321 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 TAF15Q92804 592 aaKnown RBP eCLIP25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 MEGF9Q9H1U4 602 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 CALYQ9NYX4 217 aa25.28■■□□□ 1.64
TRAF3IP1-203ENST00000409739 TMEM30CPA0ZSE6 113 aa25.27■■□□□ 1.64
TRAF3IP1-203ENST00000409739 FAM172BPA6NC97 362 aa25.27■■□□□ 1.64
TRAF3IP1-203ENST00000409739 UNC119Q13432 240 aa25.27■■□□□ 1.64
TRAF3IP1-203ENST00000409739 OR52W1Q6IF63 320 aa25.27■■□□□ 1.64
TRAF3IP1-203ENST00000409739 RAB12Q6IQ22 244 aa25.27■■□□□ 1.64
TRAF3IP1-203ENST00000409739 PLGRKTQ9HBL7 147 aa25.27■■□□□ 1.64
TRAF3IP1-203ENST00000409739 TRAV39A0A0B4J263 110 aa25.26■■□□□ 1.63
TRAF3IP1-203ENST00000409739 BPNT1O95861 308 aa25.26■■□□□ 1.63
TRAF3IP1-203ENST00000409739 GALP22466 123 aa25.26■■□□□ 1.63
TRAF3IP1-203ENST00000409739 QRFPP83859 136 aa25.26■■□□□ 1.63
TRAF3IP1-203ENST00000409739 DYNAPQ8N1N2 210 aa25.26■■□□□ 1.63
TRAF3IP1-203ENST00000409739 DYRK2Q92630 601 aa25.26■■□□□ 1.63
TRAF3IP1-203ENST00000409739 TMEM59Q9BXS4 323 aa25.26■■□□□ 1.63
TRAF3IP1-203ENST00000409739 VPREB3Q9UKI3 123 aa25.26■■□□□ 1.63
TRAF3IP1-203ENST00000409739 ANK2Q01484 3957 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 SHISA3A0PJX4 238 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 BTBD17A6NE02 478 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 TMEM14DPA8MWL7 114 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 MCRIP1C9JLW8 97 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 IL1AP01583 271 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 CD34P28906 385 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 P2RY14Q15391 338 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 LRRC75BQ2VPJ9 315 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 C12orf54Q6X4T0 127 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 ZNF497Q6ZNH5 498 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 KCNG3Q8TAE7 436 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 KIRREL1Q96J84 757 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 CYYR1Q96J86 154 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 SSX3Q99909 188 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 LINC00574Q9H8X3 128 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 PEX16Q9Y5Y5 336 aa25.25■■□□□ 1.63
TRAF3IP1-203ENST00000409739 TRAV1-2A0A0B4J238 106 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 GPR137BO60478 399 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 FUT3P21217 361 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 SSTR5P35346 364 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 RPS27AP62979 156 aaKnown RBP25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 RBM39Q14498 530 aaKnown RBP25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 AWAT1Q58HT5 328 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 ABHD12Q8N2K0 398 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 OR5R1Q8NH85 324 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 ZNF286AQ9HBT8 521 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 V9GY05 133 aa25.24■■□□□ 1.63
TRAF3IP1-203ENST00000409739 A0A087X0M5 115 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 A0A1B0GX30 115 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 H3BUX3 64 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 PDCD6O75340 191 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 MYL9P24844 172 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 RAB11BQ15907 218 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 C22orf42Q6IC83 251 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 RTN4RL2Q86UN3 420 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 OR4P4Q8NGL7 312 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 TM2D1Q9BX74 207 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 ETAA1Q9NY74 926 aa25.23■■□□□ 1.63
TRAF3IP1-203ENST00000409739 NPIPB11E5RHQ5 1161 aa25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 RPL15P61313 204 aaKnown RBP25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 FOXL1Q12952 345 aa25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 NEDD8Q15843 81 aa25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 AANATQ16613 207 aa25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 UTF1Q5T230 341 aa25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 SYT6Q5T7P8 510 aaPredicted RBP25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 MINOS1Q5TGZ0 78 aa25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 MALSU1Q96EH3 234 aa25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 NICN1Q9BSH3 213 aa25.22■■□□□ 1.63
TRAF3IP1-203ENST00000409739 IDI2-AS1Q9NZ38 188 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms