RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 COQ2Q96H96 371 aa10.42□□□□□ -0.74
CHMP3-204ENST00000409727 CCL13Q99616 98 aa10.42□□□□□ -0.74
CHMP3-204ENST00000409727 SHARPINQ9H0F6 387 aa10.42□□□□□ -0.74
CHMP3-204ENST00000409727 LIME1Q9H400 295 aa10.42□□□□□ -0.74
CHMP3-204ENST00000409727 KIF25Q9UIL4 384 aa10.42□□□□□ -0.74
CHMP3-204ENST00000409727 MEIKINA0A087WXM9 373 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 TMEM30CPA0ZSE6 113 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 OR5H14A6NHG9 310 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 TMEM178BH3BS89 294 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 PI3P19957 117 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 FCGR2CP31995 323 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 GLIPR1P48060 266 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 FXYD4P59646 89 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 SRSF1Q07955 248 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHMP3-204ENST00000409727 ZMYND11Q15326 602 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 C4orf46Q504U0 113 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 AADACL3Q5VUY0 350 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 SHEQ5VZ18 495 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 KIRREL1Q96J84 757 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 ZNF69Q9UC07 566 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 ZNF222Q9UK12 451 aa10.41□□□□□ -0.74
CHMP3-204ENST00000409727 RAI1Q7Z5J4 1906 aaPredicted RBP10.41□□□□□ -0.74
CHMP3-204ENST00000409727 KIR2DS1A0A191URI9 304 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 A1L4Q6 167 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 H7C1Q1 480 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 ZNF737O75373 536 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 KIR2DS4P43632 304 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 PPOXP50336 477 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 RAG2P55895 527 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 KIR2DS1Q14954 304 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 HERPUD1Q15011 391 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 HFEQ30201 348 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 STUMQ69YW2 141 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 C1orf87Q8N0U7 546 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 FAM216BQ8N7L0 139 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 ADAD2Q8NCV1 583 aaKnown RBP10.4□□□□□ -0.74
CHMP3-204ENST00000409727 TMEM185AQ8NFB2 350 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 TOMM40LQ969M1 308 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 NEURL2Q9BR09 285 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 OR51J1Q9H342 316 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 MAB21L2Q9Y586 359 aa10.4□□□□□ -0.74
CHMP3-204ENST00000409727 PPIAL4EA0A075B759 164 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 TRBV6-6A0A0A6YYG2 114 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 IGKV1-6A0A0C4DH72 117 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 PPIAL4DF5H284 164 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 TMPRSS2O15393 492 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 SSNA1O43805 119 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 DANCRP0C864 163 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 PPIAL4FP0DN26 164 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 PGAM2P15259 253 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 MUC1P15941 1255 aaPredicted RBP10.4□□□□□ -0.75
CHMP3-204ENST00000409727 AKR1C4P17516 323 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 COL8A2P25067 703 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 GLP1RP43220 463 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 EDDM3BP56851 147 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 HLA-DRB3P79483 266 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 GLDNQ6ZMI3 551 aaPredicted RBP10.4□□□□□ -0.75
CHMP3-204ENST00000409727 AKAP14Q86UN6 197 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 LHFPL1Q86WI0 220 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 MRGPRDQ8TDS7 321 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 DCTN5Q9BTE1 182 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 RAB1BQ9H0U4 201 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 GHITMQ9H3K2 345 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 PPIAL4AQ9Y536 164 aa10.4□□□□□ -0.75
CHMP3-204ENST00000409727 TRAV38-1A0A0B4J264 116 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 C7orf66A4D0T2 115 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 LGALS8O00214 317 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 TK1P04183 234 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 CDKN1AP38936 164 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 UBE2MP61081 183 aaKnown RBP10.39□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF660Q6AZW8 331 aaPredicted RBP10.39□□□□□ -0.75
CHMP3-204ENST00000409727 SLC35E4Q6ICL7 350 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF880Q6PDB4 577 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 Q6ZS49 121 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 SLC36A1Q7Z2H8 476 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 FGFRL1Q8N441 504 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF561Q8N587 486 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 ZDHHC22Q8N966 263 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 SNX22Q96L94 193 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 GAFA1Q96PS6 74 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 MED28Q9H204 178 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 TAF9BQ9HBM6 251 aa10.39□□□□□ -0.75
CHMP3-204ENST00000409727 HMX3A6NHT5 357 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 K7N7A8 449 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 PRAF2O60831 178 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 CCNKO75909 580 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 OR4E1P0C645 316 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 AADACP22760 399 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 RRAS2P62070 204 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-204ENST00000409727 CD83Q01151 205 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 SRSF7Q16629 238 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHMP3-204ENST00000409727 METTL11BQ5VVY1 283 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 DHRS11Q6UWP2 260 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 MOB1BQ7L9L4 216 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 GAPTQ8N292 157 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 UXS1Q8NBZ7 420 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 PPP1R35Q8TAP8 253 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms