RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 RHOXF1Q8NHV9 184 aa13.23□□□□□ -0.29
SCRN1-203ENST00000409570 PP6455Q8WZ26 134 aa13.23□□□□□ -0.29
SCRN1-203ENST00000409570 LEAP2Q969E1 77 aa13.23□□□□□ -0.29
SCRN1-203ENST00000409570 RFT1Q96AA3 541 aa13.23□□□□□ -0.29
SCRN1-203ENST00000409570 SMAD5-AS1Q9Y6J3 95 aa13.23□□□□□ -0.29
SCRN1-203ENST00000409570 ERICH4A6NGS2 130 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 AP4M1O00189 453 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 SLC33A1O00400 549 aaPredicted RBP13.22□□□□□ -0.29
SCRN1-203ENST00000409570 KDM4BO94953 1096 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 LYL1P12980 280 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 GABRB1P18505 474 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 ATF1P18846 271 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 GPR12P47775 334 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 RAB7AP51149 207 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 SCN1BQ07699 218 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 MADCAM1Q13477 382 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 GPR50Q13585 617 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 DOC2BQ14184 412 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 ATXN7L3Q14CW9 347 aaPredicted RBP13.22□□□□□ -0.29
SCRN1-203ENST00000409570 LRRC36Q1X8D7 754 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 ZNF260Q3ZCT1 412 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 OGFRL1Q5TC84 451 aaPredicted RBP13.22□□□□□ -0.29
SCRN1-203ENST00000409570 LHFPL2Q6ZUX7 228 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 KCTD20Q7Z5Y7 419 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 RDH10Q8IZV5 341 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 MRPL48Q96GC5 212 aaKnown RBP13.22□□□□□ -0.29
SCRN1-203ENST00000409570 OR6C3Q9NZP0 311 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 PSG11Q9UQ72 335 aa13.22□□□□□ -0.29
SCRN1-203ENST00000409570 A0A1W2PQL4 384 aaPredicted RBP13.21□□□□□ -0.29
SCRN1-203ENST00000409570 METTL15A6NJ78 407 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 CCRL2O00421 344 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 PRKACBP22694 351 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 KIR3DL2P43630 455 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 FOXE3Q13461 319 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 FHL3Q13643 280 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 EBI3Q14213 229 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 LPCAT4Q643R3 524 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 UTS2BQ765I0 119 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 CHST4Q8NCG5 386 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 SETD9Q8NE22 299 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 OR10H4Q8NGA5 316 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 ABCG5Q9H222 651 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 CALYQ9NYX4 217 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 IDI2-AS1Q9NZ38 188 aa13.21□□□□□ -0.29
SCRN1-203ENST00000409570 RPL36Q9Y3U8 105 aaKnown RBP13.21□□□□□ -0.29
SCRN1-203ENST00000409570 LY86O95711 162 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 ELANEP08246 267 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 GLP1RP43220 463 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 FAM220AQ7Z4H9 259 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 TGIF2LXQ8IUE1 241 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 DHRSXQ8N5I4 330 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 Q8N6K4 173 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 Q8N9W7 124 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 OR13A1Q8NGR1 328 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 HAVCR2Q8TDQ0 301 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 RNF166Q96A37 237 aaPredicted RBP13.2□□□□□ -0.3
SCRN1-203ENST00000409570 RNFT2Q96EX2 444 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 EAF1Q96JC9 268 aaPredicted RBP13.2□□□□□ -0.3
SCRN1-203ENST00000409570 OPALINQ96PE5 141 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 LINC00574Q9H8X3 128 aa13.2□□□□□ -0.3
SCRN1-203ENST00000409570 EXOGQ9Y2C4 368 aaKnown RBP13.2□□□□□ -0.3
SCRN1-203ENST00000409570 SIRT4Q9Y6E7 314 aaPredicted RBP13.2□□□□□ -0.3
SCRN1-203ENST00000409570 DEGS1O15121 323 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 FADS2O95864 444 aaKnown RBP13.19□□□□□ -0.3
SCRN1-203ENST00000409570 IL1AP01583 271 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 UBCP0CG48 685 aaKnown RBP13.19□□□□□ -0.3
SCRN1-203ENST00000409570 GNG10P50151 68 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 CFHR3Q02985 330 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 RAB40BQ12829 278 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 CDK5R1Q15078 307 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 ZNF691Q5VV52 312 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 ACBD7Q8N6N7 88 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 OR51T1Q8NGJ9 327 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 OR5D18Q8NGL1 313 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 C4orf3Q8WVX3 66 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 SPSB1Q96BD6 273 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 FGGYQ96C11 551 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 SPACA5Q96QH8 159 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 GON7Q9BXV9 100 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 PALMDQ9NP74 551 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
SCRN1-203ENST00000409570 MRPS18AQ9NVS2 196 aaKnown RBP13.19□□□□□ -0.3
SCRN1-203ENST00000409570 KIF25Q9UIL4 384 aa13.19□□□□□ -0.3
SCRN1-203ENST00000409570 IGHV3-72A0A0B4J1Y9 119 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 DAPL1A0PJW8 107 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 IRGMA1A4Y4 181 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 NCBP2LA6PVI3 153 aaKnown RBP13.18□□□□□ -0.3
SCRN1-203ENST00000409570 NPIPB11E5RHQ5 1161 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 H0YJX3 145 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 J3QRE1 110 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 APOL3O95236 402 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 DBTP11182 482 aaKnown RBP13.18□□□□□ -0.3
SCRN1-203ENST00000409570 ISL1P61371 349 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 ZNF816Q0VGE8 651 aaPredicted RBP13.18□□□□□ -0.3
SCRN1-203ENST00000409570 LTC4SQ16873 150 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 OVCH2Q7RTZ1 564 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 ZNF565Q8N9K5 539 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 OR11H1Q8NG94 326 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 CYGBQ8WWM9 190 aa13.18□□□□□ -0.3
SCRN1-203ENST00000409570 VCX3BQ9H321 246 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms