RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 KCNK15Q9H427 330 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 FAM96BQ9Y3D0 163 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 PEX16Q9Y5Y5 336 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 MEIOCA2RUB1 952 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 IFITM5A6NNB3 132 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 CGB3P0DN86 165 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 CGB7P0DN87 165 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 JUNBP17275 347 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 RAB3BP20337 219 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 COX7A1P24310 79 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 GADD45AP24522 165 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 OR51D1Q8NGF3 324 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 OR13D1Q8NGV5 346 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 CHCHD6Q9BRQ6 235 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 TM2D1Q9BX74 207 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 STEAP1Q9UHE8 339 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 SESN1Q9Y6P5 492 aa16.18■□□□□ 0.18
PDLIM2-207ENST00000409417 KBTBD11-OT1A0A1B0GTJ5 212 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 TMEM30CPA0ZSE6 113 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 ZNF729A6NN14 1252 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 CLDN34H7C241 214 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 PDCD6O75340 191 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 CLDN12P56749 244 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 KRTAP24-1Q3LI83 254 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 Q6YL49 198 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 TPRA1Q86W33 373 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 OR11H6Q8NGC7 330 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 OR13A1Q8NGR1 328 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 KCTD7Q96MP8 289 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 MDFIQ99750 246 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 LINC00574Q9H8X3 128 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 FBLN5Q9UBX5 448 aa16.17■□□□□ 0.18
PDLIM2-207ENST00000409417 LOC100506127A0A0U1RQW1 187 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 DNAJC9-AS1A6NH13 148 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 RNF212BA8MTL3 300 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 TRIM77I1YAP6 450 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 MMP23AO75900 390 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 FBP1P09467 338 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 CDK2P24941 298 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 GLP1RP43220 463 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 C2orf76Q3KRA6 126 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 TIMM50Q3ZCQ8 353 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 HES5Q5TA89 166 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 ZNF497Q6ZNH5 498 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 NR2C2APQ86WQ0 139 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 NEDD4LQ96PU5 975 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 TMEM133Q9H2Q1 129 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 AIPO00170 330 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 CA11O75493 328 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 MT-ND4P03905 459 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 UBA52P62987 128 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 SLC9A3R2Q15599 337 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 C17orf58Q2M2W7 97 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 PRAMEF5Q5TYX0 476 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 OR52W1Q6IF63 320 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 GDPGP1Q6ZNW5 385 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 MRGPRDQ8TDS7 321 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 URM1Q9BTM9 101 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 LPAR5Q9H1C0 372 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 ZMAT3Q9HA38 289 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 ETAA1Q9NY74 926 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 CALYQ9NYX4 217 aa16.16■□□□□ 0.18
PDLIM2-207ENST00000409417 STAB1Q9NY15 2570 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 ODF3BA8MYP8 253 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 LDLRAD4O15165 306 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 HOXA3O43365 443 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 PAHP00439 452 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 MELTFP08582 738 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 GZMHP20718 246 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 OMGP23515 440 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 CHATP28329 748 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 LGALS4P56470 323 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 ZNF626Q68DY1 528 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 LDLRAD3Q86YD5 345 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 GAPTQ8N292 157 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 FAM89BQ8N5H3 189 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 FAM216AQ8WUB2 273 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 SSMEM1Q8WWF3 244 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 YIPF6Q96EC8 236 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 AJUBAQ96IF1 538 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 DUX5Q96PT3 197 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 NICN1Q9BSH3 213 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 CENPOQ9BU64 300 aa16.15■□□□□ 0.18
PDLIM2-207ENST00000409417 IGHV2-26A0A0B4J1V2 119 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 NOTOA8MTQ0 251 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 IL1AP01583 271 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 SDC2P34741 201 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 NKAPLQ5M9Q1 402 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 C17orf50Q8WW18 174 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 DYRK2Q92630 601 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 RNF167Q9H6Y7 350 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 LIN7BQ9HAP6 207 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 RAB22AQ9UL26 194 aa16.14■□□□□ 0.17
PDLIM2-207ENST00000409417 A0A0A6YYD4 124 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 TRAV39A0A0B4J263 110 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 TMEM272A0A1B0GTI8 110 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 UBE2QL1A1L167 161 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 NPIPB11E5RHQ5 1161 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 ARG1P05089 322 aa16.13■□□□□ 0.17
PDLIM2-207ENST00000409417 SMIM18P0DKX4 95 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms