RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 DMRTB1Q96MA1 342 aa8.4□□□□□ -1.06
TSPAN9-202ENST00000407263 CHCHD6Q9BRQ6 235 aa8.4□□□□□ -1.06
TSPAN9-202ENST00000407263 NICN1Q9BSH3 213 aa8.4□□□□□ -1.06
TSPAN9-202ENST00000407263 TMEM59Q9BXS4 323 aa8.4□□□□□ -1.06
TSPAN9-202ENST00000407263 OR51E2Q9H255 320 aa8.4□□□□□ -1.06
TSPAN9-202ENST00000407263 PCDHB16Q9NRJ7 776 aa8.4□□□□□ -1.06
TSPAN9-202ENST00000407263 LOC100506127A0A0U1RQW1 187 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 TRDV1A0A1B0GX56 115 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 hCG_1809904A0A1W2PP81 198 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 A0A1W2PPE2 198 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 A0A1W2PR64 198 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 A0A1W2PRV1 198 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 FUOMA2VDF0 154 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 C17orf98A8MV24 154 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 SLC17A2O00624 439 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 SLC22A1O15245 554 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 HOXA3O43365 443 aaPredicted RBP8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 MMP23AO75900 390 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 UBBP0CG47 229 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 IGHV1-8P0DP01 117 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 VSIG8P0DPA2 414 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 GADD45AP24522 165 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 ERP29P30040 261 aaKnown RBP8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 GDNFP39905 211 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 UBA52P62987 128 aaKnown RBP8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 LTC4SQ16873 150 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 RAB12Q6IQ22 244 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 CD200R1LQ6Q8B3 271 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 RTN4RL2Q86UN3 420 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 UBALD1Q8TB05 177 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 MRGPRDQ8TDS7 321 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 JMJD8Q96S16 334 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 C19orf24Q9BVV8 132 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 GAL3ST2Q9H3Q3 398 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 RNF167Q9H6Y7 350 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 ZNF696Q9H7X3 374 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 VCX3AQ9NNX9 186 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 TXNL4BQ9NX01 149 aaKnown RBP8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 UBE2J1Q9Y385 318 aaPredicted RBP8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 SESN1Q9Y6P5 492 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 V9GY05 133 aa8.39□□□□□ -1.07
TSPAN9-202ENST00000407263 A0A087WXM4 84 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 A0A0A6YYJ9 748 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 TMEM30CPA0ZSE6 113 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 UBE2QL1A1L167 161 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 TRIM77I1YAP6 450 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 ARG1P05089 322 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 MELTFP08582 738 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 ARSBP15848 533 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 CD36P16671 472 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 RAB3BP20337 219 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 CDK2P24941 298 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 NFYBP25208 207 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 SSTR5P35346 364 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 UBE2E1P51965 193 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 ACTG1P63261 375 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 MRPS15P82914 257 aaKnown RBP8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 PLA1AQ53H76 456 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 SYT6Q5T7P8 510 aaPredicted RBP8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 SIGIRRQ6IA17 410 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 C1orf122Q6ZSJ8 110 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 USP43Q70EL4 1123 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 OR51D1Q8NGF3 324 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 CCDC107Q8WV48 283 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 TMEM158Q8WZ71 300 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 TAF15Q92804 592 aaKnown RBP eCLIP8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 SLC25A28Q96A46 364 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 IFT22Q9H7X7 185 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 UNKLQ9H9P5 680 aaKnown RBP8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 RCC2Q9P258 522 aaKnown RBP8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 SSR3Q9UNL2 185 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 FAM96BQ9Y3D0 163 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 ATRQ13535 2644 aa8.38□□□□□ -1.07
TSPAN9-202ENST00000407263 A0A0A6YYD4 124 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 IGHV2-26A0A0B4J1V2 119 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 TRAV1-2A0A0B4J238 106 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 ZNF729A6NN14 1252 aaPredicted RBP8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 TMEM14DPA8MWL7 114 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 AIPO00170 330 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 PDCD5O14737 125 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 IGHV4-59P01825 116 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 RBP4P02753 201 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 FBP1P09467 338 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 SMIM18P0DKX4 95 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 TGFBR1P36897 503 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 KCNJ3P48549 501 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 RPS27AP62979 156 aaKnown RBP8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 MXD1Q05195 221 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 PLA2G7Q13093 441 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 SLC9A3R2Q15599 337 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 C17orf58Q2M2W7 97 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 UTF1Q5T230 341 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 LHFPL4Q7Z7J7 247 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 NR2C2APQ86WQ0 139 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 OR13D1Q8NGV5 346 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 OR4K15Q8NH41 348 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 MRPS24Q96EL2 167 aaKnown RBP8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 BARHL1Q9BZE3 327 aa8.37□□□□□ -1.07
TSPAN9-202ENST00000407263 TMEM133Q9H2Q1 129 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms