RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 UQCRFS1P47985 274 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 LINC00596Q86U02 117 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 MUC20Q8N307 709 aaPredicted RBP10.65□□□□□ -0.7
SMCR8-201ENST00000406438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMCR8-201ENST00000406438 TRAV34A0A0B4J273 112 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 MEX3AA1L020 520 aaKnown RBP10.65□□□□□ -0.7
SMCR8-201ENST00000406438 HYAL1Q12794 435 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 BCL7CQ8WUZ0 217 aaPredicted RBP10.65□□□□□ -0.7
SMCR8-201ENST00000406438 NAT8Q9UHE5 227 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 PGA4P0DJD7 388 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 PGA5P0DJD9 388 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 PTP4A1Q93096 173 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 TSPAN32Q96QS1 320 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 CRYBB2P43320 205 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 FAM78BQ5VT40 261 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 ZNF441Q8N8Z8 693 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 OR8B12Q8NGG6 310 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 MSL2Q9HCI7 577 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 CD1BP29016 333 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 RAG2P55895 527 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 TSC2P49815 1807 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 COL6A6A6NMZ7 2263 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 C21orf140B9A014 251 aa10.65□□□□□ -0.71
SMCR8-201ENST00000406438 FGF9P31371 208 aaPredicted RBP10.65□□□□□ -0.71
SMCR8-201ENST00000406438 GZMKP49863 264 aa10.65□□□□□ -0.71
SMCR8-201ENST00000406438 YBX1P67809 324 aaKnown RBP10.65□□□□□ -0.71
SMCR8-201ENST00000406438 IL24Q13007 206 aa10.65□□□□□ -0.71
SMCR8-201ENST00000406438 CT55Q8WUE5 264 aa10.65□□□□□ -0.71
SMCR8-201ENST00000406438 GPR27Q9NS67 375 aa10.65□□□□□ -0.71
SMCR8-201ENST00000406438 PPP1CCP36873 323 aaKnown RBP10.65□□□□□ -0.71
SMCR8-201ENST00000406438 OR2I1PQ8NGU4 316 aa10.65□□□□□ -0.71
SMCR8-201ENST00000406438 GPX7Q96SL4 187 aaPredicted RBP10.65□□□□□ -0.71
SMCR8-201ENST00000406438 SSX1Q16384 188 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 SLC25A42Q86VD7 318 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 OR1N2Q8NGR9 330 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 FLYWCH2Q96CP2 140 aaKnown RBP10.64□□□□□ -0.71
SMCR8-201ENST00000406438 SNRNP40Q96DI7 357 aaKnown RBP10.64□□□□□ -0.71
SMCR8-201ENST00000406438 TNFRSF12AQ9NP84 129 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 ACACAQ13085 2346 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 COL5A3P25940 1745 aaPredicted RBP10.64□□□□□ -0.71
SMCR8-201ENST00000406438 IGHV1OR21-1A0A087WYE8 117 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 CD226Q15762 336 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 NUBPLQ8TB37 319 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 MYEOVQ96EZ4 313 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 LHX9Q9NQ69 397 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 CD82P27701 267 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 B4GALNT1Q00973 533 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 OR2T10Q8NGZ9 312 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 IL22RA2Q969J5 263 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 NUDT16L1Q9BRJ7 211 aaKnown RBP10.64□□□□□ -0.71
SMCR8-201ENST00000406438 RABAC1Q9UI14 185 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 HPXP02790 462 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 RNF224P0DH78 156 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 TAS2R60P59551 318 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 ERVS71-1P61550 626 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 MRPS11P82912 194 aaKnown RBP10.64□□□□□ -0.71
SMCR8-201ENST00000406438 PSG5Q15238 335 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 SSX8Q7RTT4 187 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 DPH3Q96FX2 82 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 CXorf1O96002 111 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 MOGAT1Q96PD6 335 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 SBF2Q86WG5 1849 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 SHANK1Q9Y566 2161 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 SS18L1O75177 396 aaPredicted RBP10.64□□□□□ -0.71
SMCR8-201ENST00000406438 SPNP16150 400 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 GALNSP34059 522 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 LSM6P62312 80 aaKnown RBP10.64□□□□□ -0.71
SMCR8-201ENST00000406438 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 OR10G8Q8NGN5 311 aa10.64□□□□□ -0.71
SMCR8-201ENST00000406438 TTRP02766 147 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 RAB32Q13637 225 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 TWIST1Q15672 202 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 ANKRD55Q3KP44 614 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 CCDC144NLQ6NUI1 221 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 SLC35E3Q7Z769 313 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 PIK3IP1Q96FE7 263 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 R4GN57 208 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 A6NDN8 102 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 B4DEV8 164 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 ZNF273Q14593 569 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 PWWP2BQ6NUJ5 590 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 MUC15Q8N387 334 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 HARBI1Q96MB7 349 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 IFT22Q9H7X7 185 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 HMSDA8MTL9 139 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 CTSVO60911 334 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 FAM109BQ6ICB4 259 aaPredicted RBP10.63□□□□□ -0.71
SMCR8-201ENST00000406438 MRM1Q6IN84 353 aaKnown RBP10.63□□□□□ -0.71
SMCR8-201ENST00000406438 STXBP6Q8NFX7 210 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 PACRGQ96M98 296 aaPredicted RBP10.63□□□□□ -0.71
SMCR8-201ENST00000406438 PRNDQ9UKY0 176 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 HIST1H1BP16401 226 aaKnown RBP10.63□□□□□ -0.71
SMCR8-201ENST00000406438 OR1L6Q8NGR2 347 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 ZNF665Q9H7R5 613 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 TCF20Q9UGU0 1960 aaKnown RBP10.63□□□□□ -0.71
SMCR8-201ENST00000406438 CSN3P07498 182 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 CTF1Q16619 201 aa10.63□□□□□ -0.71
SMCR8-201ENST00000406438 FAHD2BQ6P2I3 314 aaPredicted RBP10.63□□□□□ -0.71
SMCR8-201ENST00000406438 FAHD2AQ96GK7 314 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms