RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 FAM27BQ5VT28 67 aa12.99□□□□□ -0.33
ATG4B-206ENST00000405546 SLC25A26Q70HW3 274 aa12.99□□□□□ -0.33
ATG4B-206ENST00000405546 FGFBP3Q8TAT2 258 aa12.99□□□□□ -0.33
ATG4B-206ENST00000405546 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
ATG4B-206ENST00000405546 LYL1P12980 280 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 ATP6V0CP27449 155 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 PSG4Q00888 419 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 BATFQ16520 125 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 KCNMB1Q16558 191 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 RTN4IP1Q8WWV3 396 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-206ENST00000405546 CDX2Q99626 313 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-206ENST00000405546 FBLN5Q9UBX5 448 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 OR14J1Q9UGF5 321 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 POMT1Q9Y6A1 747 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 WSB1Q9Y6I7 421 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 R4GN57 208 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 CPAMD8Q8IZJ3 1885 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 MRPL33O75394 65 aaKnown RBP12.98□□□□□ -0.33
ATG4B-206ENST00000405546 IFNA10P01566 189 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 CD55P08174 381 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 ZNF25P17030 456 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-206ENST00000405546 HERV-K104P61576 105 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 ZNF92Q03936 586 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 TMEM54Q969K7 222 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 CPNE4Q96A23 557 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-206ENST00000405546 NIPSNAP3BQ9BS92 247 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 CHD3Q12873 2000 aaKnown RBP12.98□□□□□ -0.33
ATG4B-206ENST00000405546 ADAMTS9Q9P2N4 1935 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 IGHV3-64DA0A0J9YX35 117 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 HLA-HP01893 362 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 CCL1P22362 96 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 SPCS3P61009 180 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 RPL23AP62750 156 aaKnown RBP12.98□□□□□ -0.33
ATG4B-206ENST00000405546 MRPS34P82930 218 aaKnown RBP12.98□□□□□ -0.33
ATG4B-206ENST00000405546 ARL6IP1Q15041 203 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 MALSU1Q96EH3 234 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 SGCZQ96LD1 299 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 PLA2G3Q9NZ20 509 aa12.98□□□□□ -0.33
ATG4B-206ENST00000405546 PHF1O43189 567 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-206ENST00000405546 PMELP40967 661 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 RAB1AP62820 205 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 MALLQ13021 153 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 C10orf128Q5T292 105 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 M1APQ8TC57 530 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 LRFN1Q9P244 771 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 IL17BQ9UHF5 180 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 HSD17B6O14756 317 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 RAB35Q15286 201 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 PRSS8Q16651 343 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 MPV17LQ2QL34 196 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 SLC23A3Q6PIS1 610 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 FAM89BQ8N5H3 189 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 NECAP2Q9NVZ3 263 aa12.97□□□□□ -0.33
ATG4B-206ENST00000405546 IGKV1-27A0A075B6S5 117 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 HMGB3O15347 200 aaKnown RBP12.96□□□□□ -0.33
ATG4B-206ENST00000405546 SSSCA1O60232 199 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 CD33P20138 364 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 ALDH3B1P43353 468 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 P2RY1P47900 373 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 ZNF133P52736 654 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-206ENST00000405546 LCN15Q6UWW0 184 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 MYPOPQ86VE0 399 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-206ENST00000405546 OSR2Q8N2R0 312 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 SLC25A31Q9H0C2 315 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 TMEM38BQ9NVV0 291 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-206ENST00000405546 TCFL5Q9UL49 500 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 V9GYS6 101 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 TTC28Q96AY4 2481 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 LOC102723996A0A087X1L8 192 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 E5RGE8 158 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 CER1O95813 267 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 MPZP25189 248 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 RNF138Q8WVD3 245 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 NSG2Q9Y328 171 aa12.96□□□□□ -0.33
ATG4B-206ENST00000405546 LOC102725191A0A1B0GVB3 256 aa12.96□□□□□ -0.34
ATG4B-206ENST00000405546 FIGNL2A6NMB9 653 aa12.96□□□□□ -0.34
ATG4B-206ENST00000405546 DKK1O94907 266 aa12.96□□□□□ -0.34
ATG4B-206ENST00000405546 GAPDHP04406 335 aaKnown RBP12.96□□□□□ -0.34
ATG4B-206ENST00000405546 ERVS71-1P61550 626 aa12.96□□□□□ -0.34
ATG4B-206ENST00000405546 OR2V1Q8NHB1 315 aa12.96□□□□□ -0.34
ATG4B-206ENST00000405546 TMEM68Q96MH6 324 aa12.96□□□□□ -0.34
ATG4B-206ENST00000405546 YPEL4Q96NS1 127 aa12.96□□□□□ -0.34
ATG4B-206ENST00000405546 HES7Q9BYE0 225 aa12.96□□□□□ -0.34
ATG4B-206ENST00000405546 C5orf49A4QMS7 147 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
ATG4B-206ENST00000405546 SRP19P09132 144 aaKnown RBP12.95□□□□□ -0.34
ATG4B-206ENST00000405546 SEC11BP0C7V7 166 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 SRD5A2P31213 254 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 PLGLB1Q02325 96 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 SLC25A24Q6NUK1 477 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 LHFPL1Q86WI0 220 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 LYPD6BQ8NI32 183 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 TMEM37Q8WXS4 190 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 Q96M66 194 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 LOXL2Q9Y4K0 774 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 C3orf80F5H4A9 247 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 NPBWR2P48146 333 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 SPSB1Q96BD6 273 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 NUDT16L1Q9BRJ7 211 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms