RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 SYNGR1O43759 233 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 CA11O75493 328 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 MELTFP08582 738 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 AMY2BP19961 511 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 BCL3P20749 454 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 RBM11P57052 281 aaKnown RBP13.62□□□□□ -0.23
CGREF1-205ENST00000404694 SSBP1Q04837 148 aaKnown RBP13.62□□□□□ -0.23
CGREF1-205ENST00000404694 IL13RA2Q14627 380 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 PNLIPRP3Q17RR3 467 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 MPV17LQ2QL34 196 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 SLC36A1Q7Z2H8 476 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 FAM58AQ8N1B3 248 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 FGFRL1Q8N441 504 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 FAM216BQ8N7L0 139 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 OR5T2Q8NGG2 359 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 ST8SIA4Q92187 359 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 RAB3CQ96E17 227 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 JMJD8Q96S16 334 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 NRIP2Q9BQI9 281 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 TBC1D24Q9ULP9 559 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 HSF4Q9ULV5 492 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 ST3GAL6Q9Y274 331 aa13.62□□□□□ -0.23
CGREF1-205ENST00000404694 IGHV3OR16-10A0A075B7F0 116 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 A0A1W2PP11 408 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 FOXI3A8MTJ6 420 aaPredicted RBP13.61□□□□□ -0.23
CGREF1-205ENST00000404694 LIPFP07098 398 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 GLRA1P23415 457 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 PRSS3P35030 304 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 NPBWR2P48146 333 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 AP3S2P59780 193 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 MADCAM1Q13477 382 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 C11orf91Q3C1V1 193 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 ATPAF1Q5TC12 328 aaPredicted RBP13.61□□□□□ -0.23
CGREF1-205ENST00000404694 BTN2A1Q7KYR7 527 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 BCL6BQ8N143 479 aaPredicted RBP13.61□□□□□ -0.23
CGREF1-205ENST00000404694 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.61□□□□□ -0.23
CGREF1-205ENST00000404694 FCAMRQ8WWV6 532 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 DEDD2Q8WXF8 326 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 TRIM63Q969Q1 353 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 C7orf50Q9BRJ6 194 aaKnown RBP13.61□□□□□ -0.23
CGREF1-205ENST00000404694 DNTTIP1Q9H147 329 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 IFT22Q9H7X7 185 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 SEBOXQ9HB31 216 aaPredicted RBP13.61□□□□□ -0.23
CGREF1-205ENST00000404694 SPACA1Q9HBV2 294 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 HES4Q9HCC6 221 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 ESM1Q9NQ30 184 aa13.61□□□□□ -0.23
CGREF1-205ENST00000404694 A0A0A6YYD4 124 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 SERPINE3A8MV23 424 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 ECDO95905 644 aaPredicted RBP13.6□□□□□ -0.23
CGREF1-205ENST00000404694 GLAP06280 429 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 GSTT2BP0CG30 244 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 SELLP14151 372 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 MMP9P14780 707 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 HIST1H1DP16402 221 aaKnown RBP13.6□□□□□ -0.23
CGREF1-205ENST00000404694 BLVRBP30043 206 aaPredicted RBP13.6□□□□□ -0.23
CGREF1-205ENST00000404694 ZNF260Q3ZCT1 412 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 SPIN3Q5JUX0 258 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 ZNF57Q68EA5 555 aaPredicted RBP13.6□□□□□ -0.23
CGREF1-205ENST00000404694 Q6ZTK2 550 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 IZUMO1Q8IYV9 350 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 SIGLECL1Q8N7X8 197 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 DTX3Q8N9I9 347 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 CHST4Q8NCG5 386 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 ANGPTL6Q8NI99 470 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 EMG1Q92979 244 aaKnown RBP13.6□□□□□ -0.23
CGREF1-205ENST00000404694 NICN1Q9BSH3 213 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 MS4A7Q9GZW8 240 aaPredicted RBP13.6□□□□□ -0.23
CGREF1-205ENST00000404694 NLKQ9UBE8 527 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 GLS2Q9UI32 602 aa13.6□□□□□ -0.23
CGREF1-205ENST00000404694 RPUSD1Q9UJJ7 312 aaKnown RBP13.6□□□□□ -0.23
CGREF1-205ENST00000404694 A0A1B0GVG6 124 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 NKX6-3A6NJ46 265 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 CENPXA8MT69 81 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 NXPH2O95156 264 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 TFF1P04155 84 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 TMEM50BP56557 158 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 IKZF1Q13422 519 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 MOGAT2Q3SYC2 334 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 CDNFQ49AH0 187 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 ZNF788Q6ZQV5 615 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 C9orf139Q6ZV77 190 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 GDPD3Q7L5L3 318 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 TOMM5Q8N4H5 51 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 ZDHHC22Q8N966 263 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 ZNF48Q96MX3 618 aaPredicted RBP13.59□□□□□ -0.23
CGREF1-205ENST00000404694 GAFA1Q96PS6 74 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 NEDD4LQ96PU5 975 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 PCGF1Q9BSM1 259 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 RBFOX1Q9NWB1 397 aaKnown RBP13.59□□□□□ -0.23
CGREF1-205ENST00000404694 TAS2R8Q9NYW2 309 aa13.59□□□□□ -0.23
CGREF1-205ENST00000404694 ZNF107Q9UII5 783 aaPredicted RBP13.59□□□□□ -0.23
CGREF1-205ENST00000404694 IGKV1D-17A0A075B6S4 117 aa13.58□□□□□ -0.23
CGREF1-205ENST00000404694 OR2AT4A6NND4 320 aa13.58□□□□□ -0.23
CGREF1-205ENST00000404694 TRIM77I1YAP6 450 aa13.58□□□□□ -0.23
CGREF1-205ENST00000404694 MFNGO00587 321 aa13.58□□□□□ -0.23
CGREF1-205ENST00000404694 PLA2G10O15496 165 aa13.58□□□□□ -0.23
CGREF1-205ENST00000404694 SOCS1O15524 211 aa13.58□□□□□ -0.23
CGREF1-205ENST00000404694 LYRM1O43325 122 aa13.58□□□□□ -0.23
CGREF1-205ENST00000404694 NDUFB3O43676 98 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms