RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 AMMECR1Q9Y4X0 333 aaPredicted RBP9.17□□□□□ -0.94
SPTLC1P3-201ENST00000403408 DNAH6Q9C0G6 4158 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 FUOMA2VDF0 154 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SAP30O75446 220 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 APOL3O95236 402 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 IGLV1-40P01703 118 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ATF1P18846 271 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 EPHA2P29317 976 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RSBN1Q5VWQ0 802 aaPredicted RBP9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 YIPF7Q8N8F6 280 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR10AC1Q8NH08 325 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 UBALD1Q8TB05 177 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HAVCR2Q8TDQ0 301 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MRGPRDQ8TDS7 321 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ARPC1AQ92747 370 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 UBE2E2Q96LR5 201 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RETNQ9HD89 108 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR6C3Q9NZP0 311 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MYRFQ9Y2G1 1151 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 WSB1Q9Y6I7 421 aa9.16□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MEIKINA0A087WXM9 373 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 A0A1W2PQL4 384 aaPredicted RBP9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 FAM90A10PA6NDY2 464 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 A8MZ25 164 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 DEGS1O15121 323 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SLC31A2O15432 143 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 CST1P01037 141 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ISL1P61371 349 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HAGHQ16775 308 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ACSM6Q6P461 480 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 UTS2BQ765I0 119 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 FGGYQ96C11 551 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RITA1Q96K30 269 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 VSIG4Q9Y279 399 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ABCA13Q86UQ4 5058 aa9.15□□□□□ -0.94
SPTLC1P3-201ENST00000403408 DNAH17Q9UFH2 4485 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 IGHV4OR15-8A0A075B7B6 117 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 A0A087WW49 117 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF670-ZNF695F2Z2N8 137 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SOX15O60248 233 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 MPZL2O60487 215 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 JTBO76095 146 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 GAPDHP04406 335 aaKnown RBP9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RAP2AP10114 183 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 VDAC1P21796 283 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 MYF6P23409 242 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CRISP1P54107 249 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZP1P60852 638 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 GABPB1Q06547 395 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 BNIP1Q12981 228 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 FAM98BQ52LJ0 330 aaKnown RBP9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 LHFPL2Q6ZUX7 228 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CHST4Q8NCG5 386 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR51A4Q8NGJ6 313 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR10X1Q8NGY0 326 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CASTOR1Q8WTX7 329 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RTN4IP1Q8WWV3 396 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 PP6455Q8WZ26 134 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OPALINQ96PE5 141 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 GON7Q9BXV9 100 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF446Q9NWS9 450 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 TAGLN3Q9UI15 199 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF580Q9UK33 172 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 DNAH2Q9P225 4427 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 FAT2Q9NYQ8 4349 aa9.14□□□□□ -0.95
SPTLC1P3-201ENST00000403408 METTL15A6NJ78 407 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 H0YJX3 145 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 C15orf65H3BRN8 121 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RRP9O43818 475 aaKnown RBP9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CYB5AP00167 134 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 MOSP00540 346 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SERPINA3P01011 423 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SLC2A2P11168 524 aaPredicted RBP9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CNTFRP26992 372 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CD1BP29016 333 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SOX6P35712 828 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RAB9AP51151 201 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 NANOS3P60323 173 aaKnown RBP9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 NDPQ00604 133 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 PTGES3Q15185 160 aaKnown RBP9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SPATS1Q496A3 300 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 C19orf54Q5BKX5 351 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 DHFR2Q86XF0 187 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 LINC00311Q8N616 119 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 TCEANCQ8N8B7 351 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 C10orf35Q96D05 121 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CYYR1Q96J86 154 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RASL11BQ9BPW5 248 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 TOLLIPQ9H0E2 274 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 NCOR1P1Q9H4R4 102 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF107Q9UII5 783 aaPredicted RBP9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 FBXO7Q9Y3I1 522 aa9.13□□□□□ -0.95
SPTLC1P3-201ENST00000403408 IGHV7-81A0A0B4J1V7 117 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 IGHV3-43A0A0B4J1X8 118 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ATP6V0E1O15342 81 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SNX3O60493 162 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 MITFO75030 526 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 KRT8P05787 483 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms