RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LINC00596Q86U02 117 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SPARTQ8N0X7 666 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ABHD12Q8N2K0 398 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ZNF565Q8N9K5 539 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 RFESDQ8TAC1 157 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MRGPRDQ8TDS7 321 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 NEK7Q8TDX7 302 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 FOXRED1Q96CU9 486 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MRPS24Q96EL2 167 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GFI1Q99684 422 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CLEC7AQ9BXN2 247 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 KBTBD11-OT1A0A1B0GTJ5 212 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ZNF729A6NN14 1252 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 PSMA1P25786 263 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 KCNJ3P48549 501 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 PAX5Q02548 391 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 LRRC75BQ2VPJ9 315 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 C1orf100Q5SVJ3 147 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SIGIRRQ6IA17 410 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 Q96M66 194 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SLITRK2Q9H156 845 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ZNF286AQ9HBT8 521 aa11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TBL2Q9Y4P3 447 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ARL6IP5O75915 188 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 MPIG6BO95866 241 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 IGHV3-7P01780 117 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 VSIG8P0DPA2 414 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 CD37P11049 281 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 NFYBP25208 207 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 HTR2CP28335 458 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 SSTR5P35346 364 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 RAG2P55895 527 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 LTC4SQ16873 150 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 OR52W1Q6IF63 320 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 RAB12Q6IQ22 244 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 OR4P4Q8NGL7 312 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 OR5R1Q8NH85 324 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 PIFOQ8TCI5 191 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 CCDC107Q8WV48 283 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 MALSU1Q96EH3 234 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 KIRREL1Q96J84 757 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 NCOR1P1Q9H4R4 102 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 NDUFB11Q9NX14 153 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 CALYQ9NYX4 217 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 RCC2Q9P258 522 aaKnown RBP11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 GHRLQ9UBU3 117 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 LRRC42Q9Y546 428 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 HILPDAQ9Y5L2 63 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 PEX16Q9Y5Y5 336 aa11.4□□□□□ -0.59
HLA-DQB1-202ENST00000399079 SLC22A1O15245 554 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 MRPS14O60783 128 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 FAM189A2Q15884 450 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 UBE2UQ5VVX9 321 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 SLC35E4Q6ICL7 350 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 GDPGP1Q6ZNW5 385 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 SVOPQ8N4V2 548 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 UBALD1Q8TB05 177 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 NDNFQ8TB73 568 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 LEAP2Q969E1 77 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 YTHDF1Q9BYJ9 559 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 CST11Q9H112 138 aa11.39□□□□□ -0.59
HLA-DQB1-202ENST00000399079 SHISA3A0PJX4 238 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 TMEM30CPA0ZSE6 113 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 UBE2QL1A1L167 161 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 IL1AP01583 271 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 IGLV1-47P01700 117 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 UBBP0CG47 229 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 PSMB9P28065 219 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 RPL15P61313 204 aaKnown RBP11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 UNC119Q13432 240 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 P2RY14Q15391 338 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 ZNF497Q6ZNH5 498 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 NICN1Q9BSH3 213 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 PLGRKTQ9HBL7 147 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 SPACA1Q9HBV2 294 aa11.38□□□□□ -0.59
HLA-DQB1-202ENST00000399079 A0A087X0M5 115 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 A0A1B0GX30 115 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 VGLL3A8MV65 326 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 NPIPB11E5RHQ5 1161 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 AIPO00170 330 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 CCRL2O00421 344 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 MT-ND4P03905 459 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 FUT3P21217 361 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 HTR1DP28221 377 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 CD34P28906 385 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 CLDN12P56749 244 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 QRFPP83859 136 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 RBM39Q14498 530 aaKnown RBP11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 AANATQ16613 207 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 MINOS1Q5TGZ0 78 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 DHRS7BQ6IAN0 325 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 CD200R1LQ6Q8B3 271 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 Q6ZSV7 163 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 RTN4RL2Q86UN3 420 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 OR6M1Q8NGM8 313 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 OR4K15Q8NH41 348 aa11.37□□□□□ -0.59
HLA-DQB1-202ENST00000399079 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms