RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 SOX15O60248 233 aa9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 UBE2NP61088 152 aaKnown RBP9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 ZXDAP98168 799 aa9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 BSXQ3C1V8 233 aa9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 SPATA46Q5T0L3 261 aa9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 MOB3AQ96BX8 217 aa9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 C10orf35Q96D05 121 aa9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 BOD1Q96IK1 185 aa9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 MRPL13Q9BYD1 178 aaKnown RBP9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 TMEM222Q9H0R3 208 aa9.65□□□□□ -0.86
CSGALNACT1-202ENST00000397998 EPOPA6NHQ4 379 aa9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 RNF212BA8MTL3 300 aa9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 GABRA4P48169 554 aa9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ZNF816Q0VGE8 651 aaPredicted RBP9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 WDR25Q64LD2 544 aaPredicted RBP9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 TMEM211Q6ICI0 200 aa9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 OR10P1Q8NGE3 313 aa9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 C12orf49Q9H741 205 aa9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 TUBA4BQ9H853 241 aa9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 TUBD1Q9UJT1 453 aa9.65□□□□□ -0.87
CSGALNACT1-202ENST00000397998 LRRK1Q38SD2 2015 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ATXN7O15265 892 aaPredicted RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SYNGR2O43760 224 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 BCL3P20749 454 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 AGAP20933 346 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 PKIAP61925 76 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 RAC1P63000 192 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 HTD2P86397 168 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ENDOGQ14249 297 aaKnown RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 BAGE3Q86Y29 109 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 BAGE2Q86Y30 109 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 OBP2BQ9NPH6 170 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 CACNA1EQ15878 2313 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 A0A0J9YW62 118 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ZNF729A6NN14 1252 aaPredicted RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 NDUFS6O75380 124 aaKnown RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 HSPB1P04792 205 aaKnown RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 FOLR2P14207 255 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 HOXA5P20719 270 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 CFPP27918 469 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SUCLG1P53597 346 aaKnown RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ZNF92Q03936 586 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 DMBX1Q8NFW5 382 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 Q8WTZ3 238 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 AURKAIP1Q9NWT8 199 aaPredicted RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 PRSS50Q9UI38 385 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 FAM166BA8MTA8 275 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 RBM11P57052 281 aaKnown RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SSTP61278 116 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 PINX1Q96BK5 328 aaKnown RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 CYYR1Q96J86 154 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ACTR3CQ9C0K3 210 aaPredicted RBP9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SERTAD4Q9NUC0 356 aa9.64□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SRSF10O75494 262 aaKnown RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 RNF224P0DH78 156 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 DDTP30046 118 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ZNF385CQ66K41 422 aaPredicted RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 FAM89BQ8N5H3 189 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 GALNT14Q96FL9 552 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 THOC3Q96J01 351 aaKnown RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 LIN7CQ9NUP9 197 aaKnown RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 PISDQ9UG56 409 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 PITPNC1Q9UKF7 332 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 BOKQ9UMX3 212 aaPredicted RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 B4DEV8 164 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 EFNA2O43921 213 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 BCL2P10415 239 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 PSG2P11465 335 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 COX5AP20674 150 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 GABRA2P47869 451 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 RPL29P47914 159 aaKnown RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 NPBWR2P48146 333 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 CYB561P49447 251 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 LPAL2Q16609 132 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 HIKESHIQ53FT3 197 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 FAM27BQ5VT28 67 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 OR2V1Q8NHB1 315 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 POC1BQ8TC44 478 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 PLEKHA3Q9HB20 300 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 HEYLQ9NQ87 328 aaPredicted RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 CLEC1BQ9P126 229 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 FUT9Q9Y231 359 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 R4GN57 208 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SPNS3Q6ZMD2 512 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 H2BFWTQ7Z2G1 175 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 LRP11Q86VZ4 500 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 OR10D3Q8NH80 312 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 LYZL4Q96KX0 146 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 TM2D1Q9BX74 207 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 ANGPTL4Q9BY76 406 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 LYRM2Q9NU23 88 aaPredicted RBP9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
CSGALNACT1-202ENST00000397998 A8MXE2 369 aa9.62□□□□□ -0.87
CSGALNACT1-202ENST00000397998 DUSP3P51452 185 aaPredicted RBP9.62□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SPINK9Q5DT21 86 aa9.62□□□□□ -0.87
CSGALNACT1-202ENST00000397998 SLC35E3Q7Z769 313 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms