RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TMPRSS13Q9BYE2 586 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 A0A087WV48 116 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 CCSO14618 274 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 SIX6O95475 246 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 AADACP22760 399 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 CEACAM8P31997 349 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 AVPI1Q5T686 147 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF474Q6S9Z5 364 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 FAM169BQ8N8A8 192 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF524Q96C55 264 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 HEATR5AQ86XA9 2040 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 A0A0A6YYJ9 748 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 RAB27BO00194 218 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 PPYP01298 95 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 IFNA1P01562 189 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 CTSDP07339 412 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 FCGR3AP08637 254 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 SPAG16Q8N0X2 631 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 WFIKKN1Q96NZ8 548 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 CIB3Q96Q77 187 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 SMIM3Q9BZL3 60 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 TMEM106BQ9NUM4 274 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 RDH8Q9NYR8 311 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 TMEM131Q92545 1883 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 PDGFAP04085 211 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 BRS3P32247 399 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 CAMLGP49069 296 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 NKX2-5P52952 324 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF616Q08AN1 781 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF260Q3ZCT1 412 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF626Q68DY1 528 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 GLDNQ6ZMI3 551 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 SLC25A38Q96DW6 304 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF486Q96H40 463 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF714Q96N38 554 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 PPP1R3EQ9H7J1 279 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ICE1Q9Y2F5 2266 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 A0A1B0GVG6 124 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 OMGP23515 440 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 SRP14P37108 136 aaKnown RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF816Q0VGE8 651 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 FAHD2BQ6P2I3 314 aaPredicted RBP7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF561Q8N587 486 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 GCSAMQ8N6F7 178 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ZBTB34Q8NCN2 500 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 FAHD2AQ96GK7 314 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 AKR1E2Q96JD6 320 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 C2orf50Q96LR7 162 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 SLX1AQ9BQ83 275 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 SSUH2Q9Y2M2 353 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 OR2W1Q9Y3N9 320 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 PCDH15Q96QU1 1955 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 ROS1P08922 2347 aa7.07□□□□□ -1.28
PTPRD-204ENST00000397606 FCGR3BO75015 233 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 WISP1O95388 367 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 HLA-DQB1P01920 261 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 NPBWR2P48146 333 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 ERVFRD-1P60508 538 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 ERHP84090 104 aaKnown RBP7.06□□□□□ -1.28
PTPRD-204ENST00000397606 SULT4A1Q9BR01 284 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 MRPL37Q9BZE1 423 aaKnown RBP7.06□□□□□ -1.28
PTPRD-204ENST00000397606 NAA60Q9H7X0 242 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 CBLN4Q9NTU7 201 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 PIPOXQ9P0Z9 390 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 TMED3Q9Y3Q3 217 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 C3orf85A0A1B0GTC6 90 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 SSX4O60224 188 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 B3GALNT1O75752 331 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 SPDEFO95238 335 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 OR8U8P0C7N1 319 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 IGFBP3P17936 291 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-204ENST00000397606 SLC6A1P30531 599 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 RAB13P51153 203 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 GNB1P62873 340 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 HIST1H3AP68431 136 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 AKR1C1Q04828 323 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 HIST2H3PS2Q5TEC6 136 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 C17orf107Q6ZR85 190 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 NCCRP1Q6ZVX7 275 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-204ENST00000397606 HIST2H3AQ71DI3 136 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 POC1AQ8NBT0 407 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 DYRK2Q92630 601 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 IL36GQ9NZH8 169 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 NCOR2Q9Y618 2525 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 TRAV39A0A0B4J263 110 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 ODAMA1E959 279 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 SCAF4O95104 1147 aaKnown RBP7.06□□□□□ -1.28
PTPRD-204ENST00000397606 SFT2D2O95562 160 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 KRASP01116 189 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 COX5AP20674 150 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 PSMB6P28072 239 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 WNT5AP41221 380 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF266Q14584 549 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF79Q15937 498 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 FAM76BQ5HYJ3 339 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 HDHD3Q9BSH5 251 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF319Q9P2F9 582 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 KCNK7Q9Y2U2 307 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 PQLC2LA1A4F0 135 aa7.06□□□□□ -1.28
PTPRD-204ENST00000397606 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms