RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 JUNBP17275 347 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 FUT3P21217 361 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 SAA4P35542 130 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 PRAMEF5Q5TYX0 476 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 SLC35E4Q6ICL7 350 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 OR13A1Q8NGR1 328 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 ZDHHC16Q969W1 377 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 KCTD7Q96MP8 289 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 NICN1Q9BSH3 213 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 TM2D1Q9BX74 207 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 RNF167Q9H6Y7 350 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 SESN1Q9Y6P5 492 aa17.29■□□□□ 0.36
TSPAN4-206ENST00000397408 MEIOCA2RUB1 952 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 ZNF729A6NN14 1252 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 MMP23AO75900 390 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 CFPP27918 469 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 RANBP1P43487 201 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 BAMBIQ13145 260 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 RBM39Q14498 530 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 NKAPLQ5M9Q1 402 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 ZDHHC22Q8N966 263 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 OR13D1Q8NGV5 346 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 MRGPRDQ8TDS7 321 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 YIPF6Q96EC8 236 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 CYYR1Q96J86 154 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 DUX5Q96PT3 197 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 CENPOQ9BU64 300 aa17.28■□□□□ 0.36
TSPAN4-206ENST00000397408 TRAV39A0A0B4J263 110 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 DNAJC9-AS1A6NH13 148 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 H3BUI4 141 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 AIPO00170 330 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 OMGP23515 440 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 CDK2P24941 298 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 C17orf58Q2M2W7 97 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 KRTAP24-1Q3LI83 254 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 TIMM50Q3ZCQ8 353 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 HEPN1Q6WQI6 88 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 TPRA1Q86W33 373 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 ZNF565Q8N9K5 539 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 NEDD4LQ96PU5 975 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 URM1Q9BTM9 101 aaKnown RBP17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 LPAR5Q9H1C0 372 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 ETAA1Q9NY74 926 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 CALYQ9NYX4 217 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 FAM96BQ9Y3D0 163 aa17.27■□□□□ 0.35
TSPAN4-206ENST00000397408 COL6A5A8TX70 2615 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 CHATP28329 748 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 SDC2P34741 201 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 C2orf76Q3KRA6 126 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 MIDNQ504T8 468 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 ZNF497Q6ZNH5 498 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 DYRK2Q92630 601 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 TMEM133Q9H2Q1 129 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 PRDM13Q9H4Q3 707 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 FBLN5Q9UBX5 448 aa17.26■□□□□ 0.35
TSPAN4-206ENST00000397408 A0A0A6YYD4 124 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 A0A0B4J203 849 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 TMEM272A0A1B0GTI8 110 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 KBTBD11-OT1A0A1B0GTJ5 212 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 UBE2QL1A1L167 161 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 RNF212BA8MTL3 300 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 NOTOA8MTQ0 251 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 LDLRAD4O15165 306 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 PAHP00439 452 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 GLAP06280 429 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 FBP1P09467 338 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 SLC2A2P11168 524 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 GDNFP39905 211 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 BAIAP2L2Q6UXY1 529 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 CCDC107Q8WV48 283 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 TMEM158Q8WZ71 300 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 LIN7BQ9HAP6 207 aa17.25■□□□□ 0.35
TSPAN4-206ENST00000397408 IGHV2-26A0A0B4J1V2 119 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 FAM172BPA6NC97 362 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 TRIM77I1YAP6 450 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 HOXA3O43365 443 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 AIREO43918 545 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 IL1AP01583 271 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 MT-ND4P03905 459 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 ARG1P05089 322 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 MELTFP08582 738 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 CGB3P0DN86 165 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 CGB7P0DN87 165 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 BLVRBP30043 206 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 SSTR5P35346 364 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 UBA52P62987 128 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 MXD1Q05195 221 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 PLA2G7Q13093 441 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 DYNC1I2Q13409 638 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 OR52W1Q6IF63 320 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 Q6YL49 198 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 GDPGP1Q6ZNW5 385 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 C17orf50Q8WW18 174 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 SULT4A1Q9BR01 284 aa17.24■□□□□ 0.35
TSPAN4-206ENST00000397408 ODF3BA8MYP8 253 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 CLEC2LP0C7M8 214 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 LGALS4P56470 323 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 SLC9A3R2Q15599 337 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 ZNF626Q68DY1 528 aa17.23■□□□□ 0.35
TSPAN4-206ENST00000397408 C6orf201Q7Z4U5 140 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms