RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 LIN54Q6MZP7 749 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 C20orf204Q6ZNR8 217 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 Q6ZS49 121 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 DIRC2Q96SL1 478 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 LAMP3Q9UQV4 416 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 ARFGEF3Q5TH69 2177 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 C17orf100A8MU93 164 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 SDCBPO00560 298 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-207ENST00000397200 IFNA7P01567 189 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 IGHV1-46P01743 117 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 AKR1C4P17516 323 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 BCL3P20749 454 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 FUT3P21217 361 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 TNFSF4P23510 183 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 S100A11P31949 105 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 PPOXP50336 477 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 GPM6AP51674 278 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 EXOSC2Q13868 293 aaKnown RBP12.57□□□□□ -0.4
CAPN3-207ENST00000397200 SRSF7Q16629 238 aaKnown RBP eCLIP12.57□□□□□ -0.4
CAPN3-207ENST00000397200 MPV17LQ2QL34 196 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 C11orf71Q6IPW1 123 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 Q6ZPA2 131 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 MKXQ8IYA7 352 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 DPCDQ9BVM2 203 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-207ENST00000397200 PKIBQ9C010 78 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 CXXC4Q9H2H0 198 aa12.57□□□□□ -0.4
CAPN3-207ENST00000397200 DSCAMO60469 2012 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 DCHS2Q6V1P9 2916 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 RPS10-NUDT3A0A1W2PQS6 291 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 ZNF732B4DXR9 585 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 ARPC5O15511 151 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 ADH4P08319 380 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 VAMP1P23763 118 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 HAAOP46952 286 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 ARPC4P59998 168 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 GNG3P63215 75 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 HIST2H2BCQ6DN03 193 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 TMUB2Q71RG4 321 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 LINC00596Q86U02 117 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 C12orf4Q9NQ89 552 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 NECAP2Q9NVZ3 263 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 MTCH1Q9NZJ7 389 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 AUP1Q9Y679 476 aa12.56□□□□□ -0.4
CAPN3-207ENST00000397200 FXYD6-FXYD2A0A087WZ82 144 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 LINC00862A6NCI5 91 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 CCSO14618 274 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 CFDP00746 253 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-207ENST00000397200 CTSDP07339 412 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-207ENST00000397200 TNFAIP6P98066 277 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-207ENST00000397200 IL24Q13007 206 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 ZNF345Q14585 488 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 DHRS11Q6UWP2 260 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 ZCCHC24Q8N2G6 241 aaKnown RBP12.55□□□□□ -0.4
CAPN3-207ENST00000397200 SLAMF9Q96A28 289 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 VRK1Q99986 396 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-207ENST00000397200 FXYD6Q9H0Q3 95 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 RHOFQ9HBH0 211 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 RAB18Q9NP72 206 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 LRBAP50851 2863 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 ANKRD34BA5PLL1 514 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 TMEM210A6NLX4 147 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 OR5H8P0DN80 308 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 CD200P41217 278 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 FAM209AQ5JX71 171 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 CLLU1Q5K131 121 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 ZNF573Q86YE8 665 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 CASTOR1Q8WTX7 329 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 DYRK2Q92630 601 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 MEGF10Q96KG7 1140 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 OR2V2Q96R30 315 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 ZNF2Q9BSG1 426 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-207ENST00000397200 NMES1Q9C002 83 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 LIME1Q9H400 295 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 ZNF286AQ9HBT8 521 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 IL19Q9UHD0 177 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
CAPN3-207ENST00000397200 PTPN13Q12923 2485 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 LRP5LA4QPB2 252 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 F8VVB4 439 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 F8VWA3 439 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 B3GALNT1O75752 331 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 GRPP07492 148 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 CD55P08174 381 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 CCL8P80075 99 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 BAMBIQ13145 260 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 IL13RA2Q14627 380 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 C11orf87Q6NUJ2 197 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 COQ8AQ8NI60 647 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 CCL19Q99731 98 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 EGLN1Q9GZT9 426 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 RAB1BQ9H0U4 201 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 OR51I2Q9H344 312 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 IFT22Q9H7X7 185 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 TNFSF18Q9UNG2 199 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 MAB21L2Q9Y586 359 aa12.54□□□□□ -0.4
CAPN3-207ENST00000397200 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 IGHV3-64DA0A0J9YX35 117 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms