RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 MRPL30Q8TCC3 161 aaKnown RBP10.31□□□□□ -0.76
ITGB1-202ENST00000396033 S100PBPQ96BU1 408 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 OR10C1Q96KK4 312 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 SLC2A9Q9NRM0 540 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 KCNIP3Q9Y2W7 256 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 PRR14LQ5THK1 2151 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 DSPP15924 2871 aaKnown RBP10.31□□□□□ -0.76
ITGB1-202ENST00000396033 KANTRA0A1W2PQU2 76 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 KRBOX1C9JBD0 128 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 MLNRO43193 412 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 TK1P04183 234 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 PGA5P0DJD9 388 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 ZNF718Q3SXZ3 478 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 BEX5Q5H9J7 111 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 FAM209BQ5JX69 171 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 ACOT7LQ6ZUV0 252 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 KCNRGQ8N5I3 272 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 INO80EQ8NBZ0 244 aaPredicted RBP10.31□□□□□ -0.76
ITGB1-202ENST00000396033 DCUN1D4Q92564 292 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 LRRC46Q96FV0 321 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 SFXN3Q9BWM7 321 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 SSUH2Q9Y2M2 353 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 DCHS1Q96JQ0 3298 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 ACACAQ13085 2346 aa10.31□□□□□ -0.76
ITGB1-202ENST00000396033 RNF222A6NCQ9 220 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 TRDCB7Z8K6 153 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 SIRPB1O00241 398 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 SPDEFO95238 335 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 DIRAS3O95661 229 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 TUBG1P23258 451 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 ZNF83P51522 516 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 UCP3P55916 312 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 GTF3AQ92664 365 aaKnown RBP10.3□□□□□ -0.76
ITGB1-202ENST00000396033 C2orf50Q96LR7 162 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 NRIP2Q9BQI9 281 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 TUBG2Q9NRH3 451 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 ATP23Q9Y6H3 246 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 CEP295Q9C0D2 2601 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 TUBAL3A6NHL2 446 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 OR5AC1P0C628 307 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 ERVK11-1P61568 191 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 PAN3Q58A45 887 aaKnown RBP10.3□□□□□ -0.76
ITGB1-202ENST00000396033 Q6P435 159 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 FAM169BQ8N8A8 192 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 OR11L1Q8NGX0 322 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 RASL12Q9NYN1 266 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 GSKIPQ9P0R6 139 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 M0R1B8 84 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 KITLGP21583 273 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 SP6Q3SY56 376 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 CCDC71LQ8N9Z2 235 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 POC1AQ8NBT0 407 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 SYT3Q9BQG1 590 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 RSRP1Q9BUV0 290 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 CXXC4Q9H2H0 198 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 MEMO1Q9Y316 297 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 SHANK1Q9Y566 2161 aa10.3□□□□□ -0.76
ITGB1-202ENST00000396033 OR2H2O95918 312 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 HOXA1P49639 335 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 NAAAQ02083 359 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 NHLH1Q02575 133 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 HERPUD1Q15011 391 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 TBR1Q16650 682 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 TIMM23BQ5SRD1 257 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 ZNF324BQ6AW86 544 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 C20orf204Q6ZNR8 217 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 HSD17B13Q7Z5P4 300 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 ZC4H2Q9NQZ6 224 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 A6NLC8 198 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 GPR31O00270 319 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 BCL2L11O43521 198 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 GFRA3O60609 400 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 CBLN2Q8IUK8 224 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 FAM219AQ8IW50 185 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 CISD2Q8N5K1 135 aaKnown RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 MSL2Q9HCI7 577 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 TRBV6-6A0A0A6YYG2 114 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 F8W036 122 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 KCNAB3O43448 404 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 F12P00748 615 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 IFNA21P01568 189 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 CEACAM8P31997 349 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 S100A10P60903 97 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 UBA52P62987 128 aaKnown RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 SRSF3P84103 164 aaKnown RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 TMEM187Q14656 261 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 IAH1Q2TAA2 248 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 MBNL2Q5VZF2 373 aaKnown RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 FIP1L1Q6UN15 594 aaKnown RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 BOLLQ8N9W6 283 aaKnown RBP10.29□□□□□ -0.76
ITGB1-202ENST00000396033 BPIFCQ8NFQ6 507 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 SCARB1Q8WTV0 552 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 SECTM1Q8WVN6 248 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 GALNT14Q96FL9 552 aa10.29□□□□□ -0.76
ITGB1-202ENST00000396033 SLC33A1O00400 549 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 CTXN2P0C2S0 81 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 GLI4P10075 376 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 MDH2P40926 338 aaKnown RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 HLA-DRB3P79483 266 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 Q6ZR03 302 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms