RNA–Protein interactions for RNA: ENST00000395653.9

CLN3-207, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-207ENST00000395653 GLAP06280 429 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 RNASE1P07998 156 aaKnown RBP17.68■□□□□ 0.42
CLN3-207ENST00000395653 RPS27AP62979 156 aaKnown RBP17.68■□□□□ 0.42
CLN3-207ENST00000395653 UNC119Q13432 240 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 RAB11BQ15907 218 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 ZNF626Q68DY1 528 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 OR52W1Q6IF63 320 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 OR10K2Q6IF99 312 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 RAB12Q6IQ22 244 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.68■□□□□ 0.42
CLN3-207ENST00000395653 OR13A1Q8NGR1 328 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 NEK7Q8TDX7 302 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 SSMEM1Q8WWF3 244 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 DUX5Q96PT3 197 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 TMEM133Q9H2Q1 129 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 TXNL4BQ9NX01 149 aaKnown RBP17.68■□□□□ 0.42
CLN3-207ENST00000395653 POMT1Q9Y6A1 747 aa17.68■□□□□ 0.42
CLN3-207ENST00000395653 TMEM30CPA0ZSE6 113 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 ODF3BA8MYP8 253 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 MCRIP1C9JLW8 97 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 PAHP00439 452 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 CGB3P0DN86 165 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 CGB7P0DN87 165 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 ARSBP15848 533 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 CDK2P24941 298 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 GLP1RP43220 463 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 C17orf58Q2M2W7 97 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 SIGIRRQ6IA17 410 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 OR2W3Q7Z3T1 314 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 TM2D1Q9BX74 207 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 VCX3AQ9NNX9 186 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 ZNRD1Q9P1U0 126 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 SSR3Q9UNL2 185 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 PEX16Q9Y5Y5 336 aa17.67■□□□□ 0.42
CLN3-207ENST00000395653 KBTBD11-OT1A0A1B0GTJ5 212 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 MMP23AO75900 390 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 FUT3P21217 361 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 CFPP27918 469 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 LGALS4P56470 323 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 P2RY14Q15391 338 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 PRAMEF5Q5TYX0 476 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 BRICD5Q6PL45 260 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 ZNF497Q6ZNH5 498 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 KCNK15Q9H427 330 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 LINC00574Q9H8X3 128 aa17.66■□□□□ 0.42
CLN3-207ENST00000395653 TBL2Q9Y4P3 447 aaKnown RBP17.66■□□□□ 0.42
CLN3-207ENST00000395653 PDCD6O75340 191 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 RAB3BP20337 219 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 BEND2Q8NDZ0 799 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 MRGPRDQ8TDS7 321 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 FAM3DQ96BQ1 224 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 AJUBAQ96IF1 538 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 CLEC7AQ9BXN2 247 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 CALYQ9NYX4 217 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 FBLN5Q9UBX5 448 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 STEAP1Q9UHE8 339 aa17.65■□□□□ 0.42
CLN3-207ENST00000395653 IGHV2-26A0A0B4J1V2 119 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 CA11O75493 328 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 IL1AP01583 271 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 ARG1P05089 322 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 CD36P16671 472 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 OMGP23515 440 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 IER3P46695 156 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 OR10A3P58181 314 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 GAPTQ8N292 157 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 OR51D1Q8NGF3 324 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 SPATA3Q8NHX4 192 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 OR51E2Q9H255 320 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 DPAGT1Q9H3H5 408 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 ETAA1Q9NY74 926 aa17.64■□□□□ 0.42
CLN3-207ENST00000395653 A0A087X0M5 115 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 A0A1B0GX30 115 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 TRIM64CA6NLI5 447 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 IFITM5A6NNB3 132 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 NPIPB11E5RHQ5 1161 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 IGHV4-59P01825 116 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 MT-ND4P03905 459 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 CHATP28329 748 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 CD34P28906 385 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 GDNFP39905 211 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 CLDN12P56749 244 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 HES5Q5TA89 166 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 RTN4RL2Q86UN3 420 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 C17orf50Q8WW18 174 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 URM1Q9BTM9 101 aaKnown RBP17.64■□□□□ 0.41
CLN3-207ENST00000395653 LPAR5Q9H1C0 372 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 MEGF9Q9H1U4 602 aa17.64■□□□□ 0.41
CLN3-207ENST00000395653 DNHD1Q96M86 4753 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 AIPO00170 330 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 GZMHP20718 246 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 ACTG1P63261 375 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 DYNC1I2Q13409 638 aaKnown RBP17.63■□□□□ 0.41
CLN3-207ENST00000395653 C2orf76Q3KRA6 126 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 C16orf87Q6PH81 154 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 TPRA1Q86W33 373 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 ABHD12Q8N2K0 398 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 OR10A7Q8NGE5 316 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 KIRREL1Q96J84 757 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 KCTD7Q96MP8 289 aa17.63■□□□□ 0.41
CLN3-207ENST00000395653 NEDD4LQ96PU5 975 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms