RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 TM2D1Q9BX74 207 aa13.91□□□□□ -0.18
PDZD4-202ENST00000393758 DOCK11Q5JSL3 2073 aa13.91□□□□□ -0.18
PDZD4-202ENST00000393758 ZNF818PQ6ZRF7 136 aa13.91□□□□□ -0.18
PDZD4-202ENST00000393758 OR4F5Q8NH21 305 aa13.91□□□□□ -0.18
PDZD4-202ENST00000393758 OR4F4Q96R69 305 aa13.91□□□□□ -0.18
PDZD4-202ENST00000393758 RNF122Q9H9V4 155 aa13.91□□□□□ -0.18
PDZD4-202ENST00000393758 ZDHHC8Q9ULC8 765 aa13.91□□□□□ -0.18
PDZD4-202ENST00000393758 KIR2DS1A0A191URI9 304 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 SIRPB1O00241 398 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 CDS2O95674 445 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 HNF1AP20823 631 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 VDAC1P21796 283 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 KIR2DS4P43632 304 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 KIR2DS1Q14954 304 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 NCR3LG1Q68D85 454 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 CPT1CQ8TCG5 803 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 ABHD3Q8WU67 409 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 TMEM222Q9H0R3 208 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 SLC25A22Q9H936 323 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 IL36RNQ9UBH0 155 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 IGKV1-27A0A075B6S5 117 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 HBG1P69891 147 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 HBG2P69892 147 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 PSG4Q00888 419 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 BAXQ07812 192 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 GPR27Q9NS67 375 aa13.9□□□□□ -0.18
PDZD4-202ENST00000393758 IGKV1-12A0A0C4DH73 117 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 IGKV1D-12P01611 117 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 SRP19P09132 144 aaKnown RBP13.9□□□□□ -0.19
PDZD4-202ENST00000393758 MMP7P09237 267 aaPredicted RBP13.9□□□□□ -0.19
PDZD4-202ENST00000393758 DSCR4P56555 118 aaPredicted RBP13.9□□□□□ -0.19
PDZD4-202ENST00000393758 ERVFRD-1P60508 538 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 CLN3Q13286 438 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 SPINK9Q5DT21 86 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 HEPN1Q6WQI6 88 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 CA5BP1Q8WTZ4 195 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 MSI2Q96DH6 328 aaKnown RBP13.9□□□□□ -0.19
PDZD4-202ENST00000393758 WFIKKN1Q96NZ8 548 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 OPA3Q9H6K4 179 aa13.9□□□□□ -0.19
PDZD4-202ENST00000393758 HOXA5P20719 270 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 RBM11P57052 281 aaKnown RBP13.89□□□□□ -0.19
PDZD4-202ENST00000393758 PLGLB1Q02325 96 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 KHDC3LQ587J8 217 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 NFAM1Q8NET5 270 aaPredicted RBP13.89□□□□□ -0.19
PDZD4-202ENST00000393758 DMBX1Q8NFW5 382 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 DMRT1Q9Y5R6 373 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 PI4KAP42356 2102 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 K7N7A8 449 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 PSG2P11465 335 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 G0S2P27469 103 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 CLDN15P56746 228 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 IL15RAQ13261 267 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 GALNT14Q96FL9 552 aa13.89□□□□□ -0.19
PDZD4-202ENST00000393758 THOC3Q96J01 351 aaKnown RBP13.89□□□□□ -0.19
PDZD4-202ENST00000393758 ANKRD30BLA7E2S9 258 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 KRASP01116 189 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 PRDX4Q13162 271 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 DTX1Q86Y01 620 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 KMT5CQ86Y97 462 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 TMEM171Q8WVE6 324 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 PLPPR2Q96GM1 343 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 ATP5SQ99766 215 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 MAP1LC3B2A6NCE7 125 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 OR6C6A6NF89 314 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 CEACAM18A8MTB9 384 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BKO60814 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 PITX3O75364 302 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BJP06899 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BOP23527 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BBP33778 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 FOLR3P41439 243 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BDP58876 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BCP62807 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 LPAL2Q16609 132 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST2H2BEQ16778 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.88□□□□□ -0.19
PDZD4-202ENST00000393758 ZNF468Q5VIY5 522 aaPredicted RBP13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BHQ93079 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 MUCL1Q96DR8 90 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BNQ99877 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIST1H2BMQ99879 126 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 MAP1LC3BQ9GZQ8 125 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 TUBA4BQ9H853 241 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 GLRX2Q9NS18 164 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 TINAGQ9UJW2 476 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 V9GYS6 101 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 UBE2G2P60604 165 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 HIKESHIQ53FT3 197 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 FAM27BQ5VT28 67 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 TAAR9Q96RI9 348 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 SRXN1Q9BYN0 137 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 TREM2Q9NZC2 230 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 GPR179Q6PRD1 2367 aa13.88□□□□□ -0.19
PDZD4-202ENST00000393758 RRP8O43159 456 aaKnown RBP13.87□□□□□ -0.19
PDZD4-202ENST00000393758 GATCO43716 136 aaKnown RBP13.87□□□□□ -0.19
PDZD4-202ENST00000393758 CCL1P22362 96 aa13.87□□□□□ -0.19
PDZD4-202ENST00000393758 OR10D3Q8NH80 312 aa13.87□□□□□ -0.19
PDZD4-202ENST00000393758 C12orf49Q9H741 205 aa13.87□□□□□ -0.19
PDZD4-202ENST00000393758 HS3ST3B1Q9Y662 390 aa13.87□□□□□ -0.19
PDZD4-202ENST00000393758 FER1L5A0AVI2 2057 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms