RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 LRRC28Q86X40 367 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 OR8B12Q8NGG6 310 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 CA5BP1Q8WTZ4 195 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 PDCD6IPQ8WUM4 868 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 FMC1Q96HJ9 113 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 OPALINQ96PE5 141 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 LINC01587Q99440 93 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 COA1Q9GZY4 146 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 NT5C3AQ9H0P0 336 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ALX4Q9H161 411 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 POMKQ9H5K3 350 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 C20orf96Q9NUD7 363 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 COX16Q9P0S2 106 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 LAMA4Q16363 1823 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 MUC12Q9UKN1 5478 aa-0.36□□□□□ -2.47
RNU6-1040P-201ENST00000383974 PTPRJQ12913 1337 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 NUMA1Q14980 2115 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 PLCH2O75038 1416 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 MYH11P35749 1972 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 BAZ2BQ9UIF8 2168 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 C11orf86A6NJI1 115 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 PRMT5O14744 637 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 CIB2O75838 187 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 CD200P41217 278 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 RPL14P50914 215 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ZNF90Q03938 601 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 RAD51Q06609 339 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 C2orf80Q0P641 193 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 GOLGA7BQ2TAP0 167 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 MAJINQ3KP22 176 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 BEX5Q5H9J7 111 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 CARD17Q5XLA6 110 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TBC1D21Q8IYX1 336 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 FAM19A2Q8N3H0 131 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 C15orf53Q8NAA6 179 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 BCL2L14Q9BZR8 327 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TM6SF2Q9BZW4 377 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 WDR55Q9H6Y2 383 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ZC4H2Q9NQZ6 224 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 GCNT4Q9P109 453 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 MTCH2Q9Y6C9 303 aa-0.37□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ZNF532Q9HCE3 1301 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 SLX4Q8IY92 1834 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ATAD5Q96QE3 1844 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 COL7A1Q02388 2944 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 IGHV3-73A0A0B4J1V6 119 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 IGKV1-12A0A0C4DH73 117 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 H3BPC8 53 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ZNF701M0R085 212 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 SIVA1O15304 175 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 GNRH2O43555 120 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 DENRO43583 198 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 IGKV1D-12P01611 117 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 OR5AL1P0C617 328 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 PRKACAP17612 351 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 DNAJC3Q13217 504 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TPRG1LQ5T0D9 272 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 SYT6Q5T7P8 510 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 SSX7Q7RTT5 188 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 GLT6D1Q7Z4J2 308 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 CYP4Z1Q86W10 505 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 SBSPONQ8IVN8 264 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TRAM1L1Q8N609 369 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 LFNGQ8NES3 379 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 OR8D1Q8WZ84 308 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 C12orf4Q9NQ89 552 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 EXTL2Q9UBQ6 330 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 WASHC3Q9Y3C0 194 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 INSRP06213 1382 aa-0.38□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ARFGEF3Q5TH69 2177 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TMSB15BA0A087X1C1 80 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 F8W036 122 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 M0QXV9 152 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TCF21O43680 179 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ZNF737O75373 536 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 GPX2P18283 190 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 FAM27D1Q5T7N8 215 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 FP248Q71RG6 208 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TAS2R42Q7RTR8 314 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 NELFCDQ8IXH7 590 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TRIML2Q8N7C3 387 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ASCC1Q8N9N2 400 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 INO80EQ8NBZ0 244 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 SPPL2BQ8TCT7 592 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ISOC2Q96AB3 205 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 MCUR1Q96AQ8 359 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 CHP1Q99653 195 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 SLC38A1Q9H2H9 487 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ELOVL6Q9H5J4 265 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 C8orf4Q9NR00 106 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 NRCAMQ92823 1304 aa-0.39□□□□□ -2.47
RNU6-1040P-201ENST00000383974 TRAV8-3A0A0A6YYJ7 113 aa-0.4□□□□□ -2.47
RNU6-1040P-201ENST00000383974 LOC100653049A0A140TA62 436 aa-0.4□□□□□ -2.47
RNU6-1040P-201ENST00000383974 A0A1B0GXF2 115 aa-0.4□□□□□ -2.47
RNU6-1040P-201ENST00000383974 RFPL4AA6NLU0 287 aa-0.4□□□□□ -2.47
RNU6-1040P-201ENST00000383974 RFPL4AL1F8VTS6 287 aa-0.4□□□□□ -2.47
RNU6-1040P-201ENST00000383974 H3BP45 60 aa-0.4□□□□□ -2.47
RNU6-1040P-201ENST00000383974 M0R1B8 84 aa-0.4□□□□□ -2.47
RNU6-1040P-201ENST00000383974 ALOX12BO75342 701 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms