RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 IGSF11Q5DX21 431 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 KRBOX4Q5JUW0 171 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 DUX4L9Q6RFH8 374 aaPredicted RBP22.4■■□□□ 1.18
MSX1-201ENST00000382723 TMEM17Q86X19 198 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 GAPTQ8N292 157 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 TPRX1Q8N7U7 411 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 SNX22Q96L94 193 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 DUX4Q9UBX2 424 aa22.4■■□□□ 1.18
MSX1-201ENST00000382723 RLN1P04808 185 aa22.39■■□□□ 1.18
MSX1-201ENST00000382723 OR5H8P0DN80 308 aa22.39■■□□□ 1.18
MSX1-201ENST00000382723 CDKN1AP38936 164 aa22.39■■□□□ 1.18
MSX1-201ENST00000382723 ZNF880Q6PDB4 577 aa22.39■■□□□ 1.18
MSX1-201ENST00000382723 Q6ZS49 121 aa22.39■■□□□ 1.18
MSX1-201ENST00000382723 GAFA1Q96PS6 74 aa22.39■■□□□ 1.18
MSX1-201ENST00000382723 KIR2DS1A0A191URI9 304 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 FABP7O15540 132 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 GOSR1O95249 250 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 KIR2DS4P43632 304 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 GLIPR1P48060 266 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 KCNJ3P48549 501 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 SEC61A1P61619 476 aaKnown RBP22.39■■□□□ 1.17
MSX1-201ENST00000382723 BTG1P62324 171 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 KIR2DS1Q14954 304 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 SLC35E4Q6ICL7 350 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 ZNF561Q8N587 486 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 MRGPRFQ96AM1 343 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 SDSLQ96GA7 329 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 SLC25A21Q9BQT8 299 aaPredicted RBP22.39■■□□□ 1.17
MSX1-201ENST00000382723 CLEC4MQ9H2X3 399 aaPredicted RBP22.39■■□□□ 1.17
MSX1-201ENST00000382723 ZNF665Q9H7R5 613 aa22.39■■□□□ 1.17
MSX1-201ENST00000382723 MEIKINA0A087WXM9 373 aa22.38■■□□□ 1.17
MSX1-201ENST00000382723 DHFRP00374 187 aa22.38■■□□□ 1.17
MSX1-201ENST00000382723 ZMYND11Q15326 602 aa22.38■■□□□ 1.17
MSX1-201ENST00000382723 FAM216BQ8N7L0 139 aa22.38■■□□□ 1.17
MSX1-201ENST00000382723 TMEM185AQ8NFB2 350 aa22.38■■□□□ 1.17
MSX1-201ENST00000382723 PPP1R35Q8TAP8 253 aa22.38■■□□□ 1.17
MSX1-201ENST00000382723 TMPRSS13Q9BYE2 586 aa22.38■■□□□ 1.17
MSX1-201ENST00000382723 ALG5Q9Y673 324 aa22.38■■□□□ 1.17
MSX1-201ENST00000382723 K7N7A8 449 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 PEX14O75381 377 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 TK1P04183 234 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 ANXA7P20073 488 aaKnown RBP22.37■■□□□ 1.17
MSX1-201ENST00000382723 OR6F1Q8NGZ6 308 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 TERB2Q8NHR7 220 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 ZNF2Q9BSG1 426 aaPredicted RBP22.37■■□□□ 1.17
MSX1-201ENST00000382723 SPTAN1Q13813 2472 aaKnown RBP22.37■■□□□ 1.17
MSX1-201ENST00000382723 NPY4RP50391 375 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 HLA-DRB3P79483 266 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 SP5Q6BEB4 398 aaPredicted RBP22.37■■□□□ 1.17
MSX1-201ENST00000382723 ZNF788Q6ZQV5 615 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 MOB1BQ7L9L4 216 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 PRR18Q8N4B5 295 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 GIMAP1Q8WWP7 306 aa22.37■■□□□ 1.17
MSX1-201ENST00000382723 MEX3AA1L020 520 aaKnown RBP22.36■■□□□ 1.17
MSX1-201ENST00000382723 MGST3O14880 152 aa22.36■■□□□ 1.17
MSX1-201ENST00000382723 BET1O15155 118 aa22.36■■□□□ 1.17
MSX1-201ENST00000382723 TMPRSS2O15393 492 aa22.36■■□□□ 1.17
MSX1-201ENST00000382723 TLE4Q04727 773 aa22.36■■□□□ 1.17
MSX1-201ENST00000382723 UBALD1Q8TB05 177 aa22.36■■□□□ 1.17
MSX1-201ENST00000382723 NEU4Q8WWR8 484 aaPredicted RBP22.36■■□□□ 1.17
MSX1-201ENST00000382723 NKX6-3A6NJ46 265 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 J3QKU1 62 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 COX6B1P14854 86 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 TMED4Q7Z7H5 227 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 MARCH1Q8TCQ1 289 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 DACT3Q96B18 629 aaPredicted RBP22.35■■□□□ 1.17
MSX1-201ENST00000382723 LIME1Q9H400 295 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 VSIG4Q9Y279 399 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 RAG2P55895 527 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 EDDM3BP56851 147 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 IL13RA1P78552 427 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 HERPUD1Q15011 391 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 AADACL3Q5VUY0 350 aa22.35■■□□□ 1.17
MSX1-201ENST00000382723 MYOZ1Q9NP98 299 aaPredicted RBP22.35■■□□□ 1.17
MSX1-201ENST00000382723 MBNL3Q9NUK0 354 aaKnown RBP22.35■■□□□ 1.17
MSX1-201ENST00000382723 IGKV1-6A0A0C4DH72 117 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 POM121CA8CG34 1229 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 SIGLEC5O15389 551 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 DAOP14920 347 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 FCGR2CP31995 323 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 LHFPL1Q86WI0 220 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 MRGPRDQ8TDS7 321 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 IL1F10Q8WWZ1 152 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 KIRREL1Q96J84 757 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 TAF9BQ9HBM6 251 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 DLL4Q9NR61 685 aa22.34■■□□□ 1.17
MSX1-201ENST00000382723 A0A0A6YYJ9 748 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 OR5H14A6NHG9 310 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 NFYAP23511 347 aaPredicted RBP22.33■■□□□ 1.17
MSX1-201ENST00000382723 GLP1RP43220 463 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 ATPAF1Q5TC12 328 aaPredicted RBP22.33■■□□□ 1.17
MSX1-201ENST00000382723 OR5D13Q8NGL4 314 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 OR4A4PQ8NGN8 299 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 DCTN5Q9BTE1 182 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 PLEKHF2Q9H8W4 249 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 KCNIP1Q9NZI2 227 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 MGAT4AQ9UM21 535 aa22.33■■□□□ 1.17
MSX1-201ENST00000382723 RP2O75695 350 aa22.33■■□□□ 1.16
MSX1-201ENST00000382723 BAMBIQ13145 260 aa22.33■■□□□ 1.16
MSX1-201ENST00000382723 ZNF660Q6AZW8 331 aaPredicted RBP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms