RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
SNCAIP-203ENST00000379538 LRRC18Q8N456 261 aa11.96□□□□□ -0.49
SNCAIP-203ENST00000379538 SLC35G3Q8N808 338 aa11.96□□□□□ -0.49
SNCAIP-203ENST00000379538 PROK2Q9HC23 129 aa11.96□□□□□ -0.49
SNCAIP-203ENST00000379538 ANXA10Q9UJ72 324 aa11.96□□□□□ -0.49
SNCAIP-203ENST00000379538 STRAPQ9Y3F4 350 aaKnown RBP11.96□□□□□ -0.49
SNCAIP-203ENST00000379538 A0A1W2PNR3 127 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 NKX2-6A6NCS4 301 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 ST8SIA3O43173 380 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 PTBP3O95758 552 aaKnown RBP11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 ZNF728P0DKX0 622 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 RAB11AP62491 216 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 FBXL14Q8N1E6 418 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 OR2AJ1Q8NGZ0 328 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 TP53RKQ96S44 253 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 NIPSNAP3BQ9BS92 247 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 NAA60Q9H7X0 242 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 SLC2A9Q9NRM0 540 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 SERINC1Q9NRX5 453 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 GLRX2Q9NS18 164 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 B3GAT1Q9P2W7 334 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 NBEAQ8NFP9 2946 aa11.96□□□□□ -0.5
SNCAIP-203ENST00000379538 SMCO3A2RU48 225 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 A6NIZ1 184 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 SSSCA1O60232 199 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 GZMBP10144 247 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 SFTPDP35247 375 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 GLIPR1P48060 266 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 RAP1BP61224 184 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 PRSS8Q16651 343 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 CXorf66Q5JRM2 361 aaPredicted RBP11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 FAM180AQ6UWF9 173 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 OR5C1Q8NGR4 320 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 RNASE11Q8TAA1 199 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 ZPBPQ9BS86 351 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 CALHM2Q9HA72 323 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 TPRP12270 2363 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 IL18BPO95998 194 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 MMP7P09237 267 aaPredicted RBP11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 LIFP15018 202 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 DAP3P51398 398 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 RPL23AP62750 156 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 EXT1Q16394 746 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 MPV17LQ2QL34 196 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 NECAP1Q8NC96 275 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 SSC4DQ8WTU2 575 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 HAS2Q92819 552 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 MSI2Q96DH6 328 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 NEU1Q99519 415 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 PTPRBP23467 1997 aa11.95□□□□□ -0.5
SNCAIP-203ENST00000379538 ZFP92A6NM28 416 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 A8MWP6 167 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 TMEM50AO95807 157 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 RFPL3SP0C7P2 107 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 NR2C1P13056 603 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 SSR4P51571 173 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 CLRN1P58418 232 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 SPCS3P61009 180 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 C17orf67Q0P5P2 114 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 EIF3IQ13347 325 aaKnown RBP11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 HNF4GQ14541 408 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 PNRC2Q9NPJ4 139 aaKnown RBP11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 ASCL3Q9NQ33 180 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 GNG13Q9P2W3 67 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 A0A1W2PQD3 144 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 H3BP45 60 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 MLF1P58340 268 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 DCAF10Q5QP82 559 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 GPR157Q5UAW9 335 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 BEND4Q6ZU67 534 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 BCO1Q9HAY6 547 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 CHST11Q9NPF2 352 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 DEPPQ9NTK1 212 aa11.94□□□□□ -0.5
SNCAIP-203ENST00000379538 PINLYPA6NC86 204 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 PGA3P0DJD8 388 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 M1APQ8TC57 530 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 C18orf12Q96KH6 178 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 SIGLEC12Q96PQ1 595 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 GPR173Q9NS66 373 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 OR14J1Q9UGF5 321 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 TMED3Q9Y3Q3 217 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 NCKAP5O14513 1909 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 HLA-HP01893 362 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 AMBPP02760 352 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 COX5BP10606 129 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 DUSP1P28562 367 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 DYNLT3P51808 116 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 ZNF154Q13106 437 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 ESPL1Q14674 2120 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 SLC22A25Q6T423 547 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 LFNGQ8NES3 379 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 CLDND2Q8NHS1 167 aa11.93□□□□□ -0.5
SNCAIP-203ENST00000379538 POC1BQ8TC44 478 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms