RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 DYRK2Q92630 601 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 TMEM147Q9BVK8 224 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 PRSS50Q9UI38 385 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 TUBGCP6Q96RT7 1819 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 MFNGO00587 321 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 HRASP01112 189 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 FBP1P09467 338 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 HTR1DP28221 377 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 IL24Q13007 206 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 LY6EQ16553 131 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 HLA-DRB5Q30154 266 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 SLC45A2Q9UMX9 530 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 KIAA1217Q5T5P2 1943 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 OR10J1P30954 320 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 ZNF880Q6PDB4 577 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 OR10D3Q8NH80 312 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 MRPL24Q96A35 216 aaKnown RBP10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 CRISP2P16562 243 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 RCC1P18754 421 aaPredicted RBP10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 CD1BP29016 333 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 KIR2DS2P43631 304 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 EFNB2P52799 333 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 PNRC1Q12796 327 aaPredicted RBP10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 CD226Q15762 336 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 DEFB121Q5J5C9 76 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 TMEM91Q6ZNR0 172 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 LIAT1Q6ZQX7 453 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 SLC36A1Q7Z2H8 476 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 PRSS3P2Q8NHM4 247 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 PTP4A1Q93096 173 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 COX14Q96I36 57 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 TCFL5Q9UL49 500 aa10.55□□□□□ -0.72
PCDHA9-201ENST00000378122 HRKO00198 91 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 BMI1P35226 326 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 ZFP36L2P47974 494 aaKnown RBP10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 TCTAP57738 103 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 OR10A7Q8NGE5 316 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 CAMPP49913 170 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 GZMMP51124 257 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 FOXL2P58012 376 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 NXPH1P58417 271 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 LSM11P83369 360 aaKnown RBP eCLIP10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 ATP1A1-AS1Q5TC04 95 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 TMEM56Q96MV1 263 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 SCN1AP35498 2009 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 CHST1O43916 411 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 ECSCRQ19T08 205 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 FNDC7Q5VTL7 733 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 DPPA3Q6W0C5 159 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 NUFIP2Q7Z417 695 aaKnown RBP10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 OR1L4Q8NGR5 311 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 ADIPOR1Q96A54 375 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 HSD17B10Q99714 261 aaKnown RBP10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 RABAC1Q9UI14 185 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 KLK13Q9UKR3 277 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 TRAV8-7A0A075B6U6 113 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 CGB1A6NKQ9 187 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 CD40P25942 277 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 DEGS2Q6QHC5 323 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 ETV3LQ6ZN32 361 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 WDR13Q9H1Z4 485 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 FKBP11Q9NYL4 201 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 FAM181BA6NEQ2 426 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 B4DEV8 164 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 TRDCB7Z8K6 153 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 C11orf94C9JXX5 98 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 M0QZK8 103 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 GGCTO75223 188 aaKnown RBP10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 CD160O95971 181 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 RPL7P18124 248 aaKnown RBP10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 TCL1AP56279 114 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 MICBQ29980 383 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 OR1B1Q8NGR6 318 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 SNRPCP09234 159 aaKnown RBP10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 OR3A1P47881 315 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 PPOXP50336 477 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 DHRS11Q6UWP2 260 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 MRGPRGQ86SM5 289 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 ATG4DQ86TL0 474 aaPredicted RBP10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 OR4F17Q8NGA8 305 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 LRRC29Q8WV35 223 aa10.54□□□□□ -0.72
PCDHA9-201ENST00000378122 GDF9O60383 454 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 CIDEAO60543 219 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 ANKRD34CP0C6C1 535 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 EWSR1Q01844 656 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 PIMREGQ9BSJ6 248 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 PARP11Q9NR21 331 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 B2MP61769 119 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 OVCH2Q7RTZ1 564 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 ZNF707Q96C28 371 aaPredicted RBP10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 TUBA4BQ9H853 241 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 FAM60AQ9NP50 221 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 TRBV5-3A0A0A0MS03 114 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 KLF3P57682 345 aaPredicted RBP10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 KLRB1Q12918 225 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 GAPTQ8N292 157 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 RFLNBQ8N5W9 214 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 ST6GALNAC2Q9UJ37 374 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 UFC1Q9Y3C8 167 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms