RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 OR52N1Q8NH53 320 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 TOMM40LQ969M1 308 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 RPEQ96AT9 228 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 TMEM80Q96HE8 168 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 PCDHB16Q9NRJ7 776 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 CLEC2DQ9UHP7 191 aa16.78■□□□□ 0.28
VSX1-201ENST00000376707 AMMECR1Q9Y4X0 333 aaPredicted RBP16.78■□□□□ 0.28
VSX1-201ENST00000376707 TSSC4Q9Y5U2 329 aaPredicted RBP16.78■□□□□ 0.28
VSX1-201ENST00000376707 TRAV24A0A0B4J272 114 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 SH2D7A6NKC9 451 aaPredicted RBP16.77■□□□□ 0.28
VSX1-201ENST00000376707 LALBAP00709 142 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 FAM106CPP0CH98 169 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 CGB3P0DN86 165 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 CGB7P0DN87 165 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 RCN1Q15293 331 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 TCTEX1D4Q5JR98 221 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 DMKNQ6E0U4 476 aaPredicted RBP16.77■□□□□ 0.28
VSX1-201ENST00000376707 OR13A1Q8NGR1 328 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 MYDGFQ969H8 173 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 TMEM138Q9NPI0 162 aa16.77■□□□□ 0.28
VSX1-201ENST00000376707 IL1AP01583 271 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 PF4P02776 101 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 AMY1AP04745 511 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 AMY2AP04746 511 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 MED21Q13503 144 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 PIGYQ3MUY2 71 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 KHDC1LQ5JSQ8 128 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 WFDC9Q8NEX5 89 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 OR10K1Q8NGX5 313 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 GHSRQ92847 366 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 LEAP2Q969E1 77 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 LINC00574Q9H8X3 128 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 AURKAIP1Q9NWT8 199 aaPredicted RBP16.76■□□□□ 0.27
VSX1-201ENST00000376707 IDI2-AS1Q9NZ38 188 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 IL36GQ9NZH8 169 aa16.76■□□□□ 0.27
VSX1-201ENST00000376707 TRBV5-5A0A0J9YX44 114 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 J3QR06 171 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 GPX5O75715 221 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 IGHV3-7P01780 117 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 IGLL1P15814 213 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 KCNJ3P48549 501 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 LOXL3P58215 753 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 PPP3R1P63098 170 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 LTC4SQ16873 150 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 YIF1BQ5BJH7 314 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 NHLRC3Q5JS37 347 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 MRGPRDQ8TDS7 321 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 GGHQ92820 318 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 IFT22Q9H7X7 185 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 CHCHD3Q9NX63 227 aaKnown RBP16.75■□□□□ 0.27
VSX1-201ENST00000376707 MOB4Q9Y3A3 225 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 NOTCH3Q9UM47 2321 aa16.75■□□□□ 0.27
VSX1-201ENST00000376707 CASQ2O14958 399 aaPredicted RBP16.74■□□□□ 0.27
VSX1-201ENST00000376707 HTR3BO95264 441 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 SNRNP70P08621 437 aaKnown RBP16.74■□□□□ 0.27
VSX1-201ENST00000376707 IGFBP3P17936 291 aaPredicted RBP16.74■□□□□ 0.27
VSX1-201ENST00000376707 BDKRB2P30411 391 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 ZNF93P35789 620 aaPredicted RBP16.74■□□□□ 0.27
VSX1-201ENST00000376707 RPS11P62280 158 aaKnown RBP eCLIP16.74■□□□□ 0.27
VSX1-201ENST00000376707 ST3GAL4Q11206 333 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 MADCAM1Q13477 382 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 OGFRL1Q5TC84 451 aaPredicted RBP16.74■□□□□ 0.27
VSX1-201ENST00000376707 DDI2Q5TDH0 399 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 RSBN1Q5VWQ0 802 aaPredicted RBP16.74■□□□□ 0.27
VSX1-201ENST00000376707 FOXB2Q5VYV0 432 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 OR56B4Q8NH76 319 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 RFESDQ8TAC1 157 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 PLPPR1Q8TBJ4 325 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 FBLIM1Q8WUP2 373 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 PGLYRP3Q96LB9 341 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 CNOT2Q9NZN8 540 aaKnown RBP16.74■□□□□ 0.27
VSX1-201ENST00000376707 PSG11Q9UQ72 335 aa16.74■□□□□ 0.27
VSX1-201ENST00000376707 EFCAB10A6NFE3 127 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 CDRT1O95170 752 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 GNAO1P09471 354 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 CAPGP40121 348 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 GNG10P50151 68 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 RIPK1Q13546 671 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 HES1Q14469 280 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 Q499Y3 187 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 LAIR2Q6ISS4 152 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 C10orf99Q6UWK7 81 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 THNSL2Q86YJ6 484 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 OR13C5Q8NGS8 318 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 DPCDQ9BVM2 203 aaPredicted RBP16.73■□□□□ 0.27
VSX1-201ENST00000376707 METTL9Q9H1A3 318 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 ING4Q9UNL4 249 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 ST3GAL6Q9Y274 331 aa16.73■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A18PA6NE21 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A16PA6NEW6 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A20PA6NIJ5 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A9PA6NNJ1 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A12PA8MX19 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A5PA8MXJ8 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 NPIPB11E5RHQ5 1161 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 CSTBP04080 98 aaKnown RBP16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A15PP0C7V4 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A13PP0C7W8 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A14PP0C7W9 464 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 FAM90A24PP0C7X0 464 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms