RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 IGKV1-27A0A075B6S5 117 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 SPAARA0A1B0GVQ0 90 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 C5orf49A4QMS7 147 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 OR5H14A6NHG9 310 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 SPRY1O43609 319 aaPredicted RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 HLA-HP01893 362 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 SLC25A4P12235 298 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 TDGF1P3P51864 188 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 BATFQ16520 125 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 ZNF674Q2M3X9 581 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 ATP1A1-AS1Q5TC04 95 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 C9orf135Q5VTT2 229 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FBXW9Q5XUX1 488 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 NCR3LG1Q68D85 454 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 NUFIP2Q7Z417 695 aaKnown RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 P4HA3Q7Z4N8 544 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 SAXO1Q8IYX7 474 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 OR5L1Q8NGL2 311 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 RNASE8Q8TDE3 154 aaKnown RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 ZNF701Q9NV72 531 aaPredicted RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 DOK5Q9P104 306 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 SPEGQ15772 3267 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A10PA6NDY2 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A18PA6NE21 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A16PA6NEW6 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A20PA6NIJ5 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A8PA6NJQ4 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A7PA6NKC0 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A22PA8MWA6 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A12PA8MX19 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A5PA8MXJ8 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A23PA8MXZ1 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 ANGPTL7O43827 346 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 CST4P01036 141 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 OPN1MWP04001 364 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A15PP0C7V4 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A13PP0C7W8 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A14PP0C7W9 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM90A24PP0C7X0 464 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 OPN1MW2P0DN77 364 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 OPN1MW3P0DN78 364 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 CCNOP22674 350 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 RSPO4Q2I0M5 234 aaPredicted RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 RPUSD3Q6P087 351 aaKnown RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 C6orf201Q7Z4U5 140 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 OR51F2Q8NH61 342 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 OR5R1Q8NH85 324 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 GMPPAQ96IJ6 420 aaPredicted RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 HIST1H2AAQ96QV6 131 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 C14orf166Q9Y224 244 aaKnown RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 OSGIN2Q9Y236 505 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 LIPGQ9Y5X9 500 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 TTC28Q96AY4 2481 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 ELOA3CA0A087WX78 387 aaPredicted RBP7.07□□□□□ -1.28
UBR4-202ENST00000375224 FIGNL2A6NMB9 653 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 A6NNC1 897 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 SFT2D2O95562 160 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 CCL11P51671 97 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 TAF9Q16594 264 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 S100A7AQ86SG5 101 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 RTN4RL2Q86UN3 420 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 ADAD2Q8NCV1 583 aaKnown RBP7.07□□□□□ -1.28
UBR4-202ENST00000375224 OR1K1Q8NGR3 316 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 CASTOR1Q8WTX7 329 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 PACRGQ96M98 296 aaPredicted RBP7.07□□□□□ -1.28
UBR4-202ENST00000375224 FN3KRPQ9HA64 309 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 BARX1Q9HBU1 254 aaPredicted RBP7.07□□□□□ -1.28
UBR4-202ENST00000375224 DNAJC4Q9NNZ3 241 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 DNAJC13O75165 2243 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 TRAV17A0A0B4J275 112 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 A0A1W2PN81 502 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 ZNF850A8MQ14 1090 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 SFTA3P0C7M3 94 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 CHATP28329 748 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 CHRNA7P36544 502 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 NPY4RP50391 375 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 HMGN3Q15651 99 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 C3AR1Q16581 482 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 IGFL2Q6UWQ7 119 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 ZNF705AQ6ZN79 300 aaPredicted RBP7.07□□□□□ -1.28
UBR4-202ENST00000375224 ZDHHC23Q8IYP9 409 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 OR13G1Q8NGZ3 307 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 MRGPRDQ8TDS7 321 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 RNF141Q8WVD5 230 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 WDR89Q96FK6 387 aaPredicted RBP7.07□□□□□ -1.28
UBR4-202ENST00000375224 POM121L2Q96KW2 1035 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 CLUHP3Q96NS8 147 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 NRIP2Q9BQI9 281 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 SULT4A1Q9BR01 284 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 C5orf66Q9H5L9 145 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 SPRR3Q9UBC9 169 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 ST3GAL6Q9Y274 331 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 DMDP11532 3685 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 J3QW42 95 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 NKX2-8O15522 239 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 OR2F2O95006 317 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 IGHG3P01860 377 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 RPL29P47914 159 aaKnown RBP7.07□□□□□ -1.28
UBR4-202ENST00000375224 TGFBR3Q03167 851 aa7.07□□□□□ -1.28
UBR4-202ENST00000375224 OR2F1Q13607 317 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms