RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 TPRA1Q86W33 373 aa13.06□□□□□ -0.32
HDHD3-202ENST00000374180 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
HDHD3-202ENST00000374180 JMJD8Q96S16 334 aa13.06□□□□□ -0.32
HDHD3-202ENST00000374180 GAL3ST2Q9H3Q3 398 aa13.06□□□□□ -0.32
HDHD3-202ENST00000374180 NCOR1P1Q9H4R4 102 aa13.06□□□□□ -0.32
HDHD3-202ENST00000374180 TAS2R3Q9NYW6 316 aa13.06□□□□□ -0.32
HDHD3-202ENST00000374180 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
HDHD3-202ENST00000374180 DSCAML1Q8TD84 2053 aa13.06□□□□□ -0.32
HDHD3-202ENST00000374180 COL6A5A8TX70 2615 aa13.06□□□□□ -0.32
HDHD3-202ENST00000374180 NPFFO15130 113 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 HILS1P60008 231 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 LSAMPQ13449 338 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 TUSC1Q2TAM9 212 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 DEFB112Q30KQ8 113 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 HCP5Q6MZN7 132 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 GDPGP1Q6ZNW5 385 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 ZDHHC16Q969W1 377 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 YIPF6Q96EC8 236 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 ZNF48Q96MX3 618 aaPredicted RBP13.05□□□□□ -0.32
HDHD3-202ENST00000374180 NEDD4LQ96PU5 975 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 URM1Q9BTM9 101 aaKnown RBP13.05□□□□□ -0.32
HDHD3-202ENST00000374180 FAM96BQ9Y3D0 163 aa13.05□□□□□ -0.32
HDHD3-202ENST00000374180 TMEM30CPA0ZSE6 113 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 MEIOCA2RUB1 952 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 SMIM30A4D0T7 59 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 CCDC160A6NGH7 325 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 PDCD6O75340 191 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 CLPXO76031 633 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 VENTXO95231 258 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 GLAP06280 429 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 COX7A1P24310 79 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 GLP1RP43220 463 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 SRSF2Q01130 221 aaKnown RBP13.04□□□□□ -0.32
HDHD3-202ENST00000374180 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 PNKDQ8N490 385 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 OR13D1Q8NGV5 346 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 CENPOQ9BU64 300 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 TM2D1Q9BX74 207 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 ETAA1Q9NY74 926 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 A0A0U1RQK1 487 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 MDFIC2A0A1B0GVS7 189 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 ZNF729A6NN14 1252 aaPredicted RBP13.04□□□□□ -0.32
HDHD3-202ENST00000374180 NOTOA8MTQ0 251 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 AIPO00170 330 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 AIREO43918 545 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 CDK2P24941 298 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 CFPP27918 469 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 SDC2P34741 201 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 ALDH3B2P48448 385 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 BAMBIQ13145 260 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 NKAPLQ5M9Q1 402 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 ZNF497Q6ZNH5 498 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 NR2C2APQ86WQ0 139 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 OR13A1Q8NGR1 328 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 NICN1Q9BSH3 213 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 FBLN5Q9UBX5 448 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 SESN1Q9Y6P5 492 aa13.04□□□□□ -0.32
HDHD3-202ENST00000374180 KBTBD11-OT1A0A1B0GTJ5 212 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 UBE2QL1A1L167 161 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 MMP23AO75900 390 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 MT-ND4P03905 459 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 GZMHP20718 246 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 OMGP23515 440 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 BLVRBP30043 206 aaPredicted RBP13.03□□□□□ -0.32
HDHD3-202ENST00000374180 SAA4P35542 130 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 LGALS4P56470 323 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 MXD1Q05195 221 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 C17orf58Q2M2W7 97 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 MIDNQ504T8 468 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 PRAMEF5Q5TYX0 476 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 OR52W1Q6IF63 320 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 MRGPRDQ8TDS7 321 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 CCDC107Q8WV48 283 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 RBM38Q9H0Z9 239 aaKnown RBP13.03□□□□□ -0.32
HDHD3-202ENST00000374180 LPAR5Q9H1C0 372 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 TMEM133Q9H2Q1 129 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 PRDM13Q9H4Q3 707 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 LIN7BQ9HAP6 207 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 RAB22AQ9UL26 194 aa13.03□□□□□ -0.32
HDHD3-202ENST00000374180 TRAV39A0A0B4J263 110 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 TMEM272A0A1B0GTI8 110 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 LDLRAD4O15165 306 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 CA11O75493 328 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 PAHP00439 452 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 FBP1P09467 338 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 CGB3P0DN86 165 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 CGB7P0DN87 165 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 SLC2A2P11168 524 aaPredicted RBP13.02□□□□□ -0.33
HDHD3-202ENST00000374180 CHATP28329 748 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 FAM89BQ8N5H3 189 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 FAAP24Q9BTP7 215 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 ESM1Q9NQ30 184 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 PLEKHJ1Q9NW61 149 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 CALYQ9NYX4 217 aa13.02□□□□□ -0.33
HDHD3-202ENST00000374180 A0A0A6YYD4 124 aa13.01□□□□□ -0.33
HDHD3-202ENST00000374180 TRIM77I1YAP6 450 aa13.01□□□□□ -0.33
HDHD3-202ENST00000374180 SOCS1O15524 211 aa13.01□□□□□ -0.33
HDHD3-202ENST00000374180 ARG1P05089 322 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms