RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 CABLES2Q9BTV7 478 aa9.36□□□□□ -0.91
LCN2-202ENST00000372998 LIN7CQ9NUP9 197 aaKnown RBP9.36□□□□□ -0.91
LCN2-202ENST00000372998 ZMAT5Q9UDW3 170 aaKnown RBP9.36□□□□□ -0.91
LCN2-202ENST00000372998 OR2W1Q9Y3N9 320 aa9.36□□□□□ -0.91
LCN2-202ENST00000372998 PUS1Q9Y606 427 aaKnown RBP eCLIP9.36□□□□□ -0.91
LCN2-202ENST00000372998 ABCA7Q8IZY2 2146 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 SEC14L6B5MCN3 397 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 TRANK1O15050 2925 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 TRAPPC6AO75865 159 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 OR13C7P0DN81 318 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 EDN3P14138 238 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 HOXA5P20719 270 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 CDX1P47902 265 aaPredicted RBP9.35□□□□□ -0.91
LCN2-202ENST00000372998 ID4P47928 161 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 GLIPR1P48060 266 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 RPS23P62266 143 aaKnown RBP9.35□□□□□ -0.91
LCN2-202ENST00000372998 GNG3P63215 75 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 HLA-DRB3P79483 266 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 KIAA0141Q14154 515 aaPredicted RBP9.35□□□□□ -0.91
LCN2-202ENST00000372998 ATP6V1FQ16864 119 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 ACER2Q5QJU3 275 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 TSPO2Q5TGU0 170 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 SPSB3Q6PJ21 355 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 FIP1L1Q6UN15 594 aaKnown RBP9.35□□□□□ -0.91
LCN2-202ENST00000372998 RBMS3Q6XE24 437 aaKnown RBP9.35□□□□□ -0.91
LCN2-202ENST00000372998 GAPTQ8N292 157 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 OR56B2PQ8NGI1 322 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 NANPQ8TBE9 248 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 MBD3L1Q8WWY6 194 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 HLA-CQ95604 372 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 MUCL1Q96DR8 90 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 ZNF837Q96EG3 531 aaPredicted RBP9.35□□□□□ -0.91
LCN2-202ENST00000372998 BTF3L4Q96K17 158 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 IP6K3Q96PC2 410 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 STRADBQ9C0K7 418 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 TOLLIPQ9H0E2 274 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 SH3BGRL3Q9H299 93 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 GP6Q9HCN6 339 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 NIT2Q9NQR4 276 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 CISD1Q9NZ45 108 aaKnown RBP9.35□□□□□ -0.91
LCN2-202ENST00000372998 TIMM9Q9Y5J7 89 aa9.35□□□□□ -0.91
LCN2-202ENST00000372998 ARID1BQ8NFD5 2236 aaPredicted RBP9.35□□□□□ -0.91
LCN2-202ENST00000372998 LOC102723971A0A1B0GUV8 181 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 CCDC85CA6NKD9 419 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 CD300LBA8K4G0 201 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 PROB1E7EW31 1015 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 CHST1O43916 411 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 PGLYRP1O75594 196 aaPredicted RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 MBP02144 154 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 BCL3P20749 454 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 PPP1CCP36873 323 aaKnown RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 HAAOP46952 286 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 NOVA1P51513 510 aaKnown RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 GFRA1P56159 465 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 ARF1P84077 181 aaKnown RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 MRPL49Q13405 166 aaKnown RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 IGSF11Q5DX21 431 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 SP5Q6BEB4 398 aaPredicted RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 C6orf15Q6UXA7 325 aaPredicted RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 PPP1R32Q7Z5V6 425 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 C1orf87Q8N0U7 546 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 ZNF610Q8N9Z0 462 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 ZFP62Q8NB50 900 aaPredicted RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 FAM216AQ8WUB2 273 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 RAB39BQ96DA2 213 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 BSCL2Q96G97 398 aaPredicted RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 YPEL4Q96NS1 127 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 SIGLEC12Q96PQ1 595 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 PARP12Q9H0J9 701 aaKnown RBP9.34□□□□□ -0.91
LCN2-202ENST00000372998 POLDIP2Q9Y2S7 368 aa9.34□□□□□ -0.91
LCN2-202ENST00000372998 FAM221AA4D161 298 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 LRRC3CA6NJW4 275 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 CLDN34H7C241 214 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 HSD17B6O14756 317 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 TXNL1O43396 289 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 SS18L1O75177 396 aaPredicted RBP9.33□□□□□ -0.92
LCN2-202ENST00000372998 OPN1MWP04001 364 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 CELA2AP08217 269 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 OPN1MW2P0DN77 364 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 OPN1MW3P0DN78 364 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 ITGA3P26006 1051 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 RPS18P62269 152 aaKnown RBP9.33□□□□□ -0.92
LCN2-202ENST00000372998 DMRTC1Q5HYR2 192 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 WIPI1Q5MNZ9 446 aaPredicted RBP9.33□□□□□ -0.92
LCN2-202ENST00000372998 ZNF818PQ6ZRF7 136 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 NUFIP2Q7Z417 695 aaKnown RBP9.33□□□□□ -0.92
LCN2-202ENST00000372998 MRGPRGQ86SM5 289 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 DTX1Q86Y01 620 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 CALHM1Q8IU99 346 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 MCEMP1Q8IX19 187 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 FAM58AQ8N1B3 248 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 OR10V1Q8NGI7 309 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 CLDND2Q8NHS1 167 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 RTL8AQ9BWD3 113 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 PRRG4Q9BZD6 226 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 P4HTMQ9NXG6 502 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 GAR1Q9NY12 217 aaKnown RBP9.33□□□□□ -0.92
LCN2-202ENST00000372998 CHD7Q9P2D1 2997 aa9.33□□□□□ -0.92
LCN2-202ENST00000372998 VAX2Q9UIW0 290 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms