RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 ACOT4Q8N9L9 421 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 OR5B3Q8NH48 314 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SPRYD4Q8WW59 207 aaPredicted RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 POPDC3Q9HBV1 291 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SLC25A37Q9NYZ2 338 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 THYN1Q9P016 225 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 KIAA1456Q9P272 454 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 PILRAQ9UKJ1 303 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 RAB22AQ9UL26 194 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 B3GALT5Q9Y2C3 310 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 PI4KAP42356 2102 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 H0YL77 283 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 H3BMH7 237 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SPRY2O43597 315 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 CHST1O43916 411 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 LRATO95237 230 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 HLA-DQB2P05538 268 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 HPNP05981 417 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 OR5G3P0C626 314 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 CD99P14209 185 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 PGAM2P15259 253 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 KIR2DS4P43632 304 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TAS2R50P59544 299 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 FOXL1Q12952 345 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 PSG5Q15238 335 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SNAI3Q3KNW1 292 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ACTL10Q5JWF8 245 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SERTAD4-AS1Q5TG53 156 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 C12orf54Q6X4T0 127 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SLC25A45Q8N413 288 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 GALNT16Q8N428 558 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF485Q8NCK3 441 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 OR4D9Q8NGE8 314 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 OR51Q1Q8NH59 317 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 DYRK2Q92630 601 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 MCEEQ96PE7 176 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 RSPO3Q9BXY4 272 aaPredicted RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SLC35B3Q9H1N7 401 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 LINC00597Q9H2U6 94 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TMEM38BQ9NVV0 291 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 FKBP11Q9NYL4 201 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ENPP4Q9Y6X5 453 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 CENPVL1A0A0U1RR11 272 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 CENPVL3A0A0U1RRI6 287 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 A0A1W2PPK0 400 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 SHISA3A0PJX4 238 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF705GA8MUZ8 300 aaPredicted RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 E7EQ34 232 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 NPIPB6E9PJ23 425 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 RBFOX2O43251 390 aaKnown RBP eCLIP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 WISP3O95389 354 aaPredicted RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 EIF4EP06730 217 aaKnown RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF19P17023 458 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 HOXB9P17482 250 aaPredicted RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 CHATP28329 748 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 PTGER1P34995 402 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 GAS1P54826 345 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 CLDN2P57739 230 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 UBE2NP61088 152 aaKnown RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 TBPL1P62380 186 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 RPS25P62851 125 aaKnown RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 DYNLT1P63172 113 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 EWSR1Q01844 656 aaKnown RBP eCLIP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ODF4Q2M2E3 257 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 RPEL1Q2QD12 228 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 CEACAM21Q3KPI0 293 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 OR10J3Q5JRS4 329 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 LDLRAD2Q5SZI1 272 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 LCTLQ6UWM7 567 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ACOT1Q86TX2 421 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 GKN2Q86XP6 184 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF547Q8IVP9 402 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 PAQR4Q8N4S7 273 aaPredicted RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 OR10G2Q8NGC3 310 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 OR4B1Q8NGF8 309 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 OR5A2Q8NGI9 324 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 RNF138Q8WVD3 245 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 NEU4Q8WWR8 484 aaPredicted RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 BTF3L4Q96K17 158 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 WDR13Q9H1Z4 485 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 MOB1AQ9H8S9 216 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ENY2Q9NPA8 101 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 MEPEQ9NQ76 525 aaPredicted RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 TMED7Q9Y3B3 224 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 LOXL2Q9Y4K0 774 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ZFHX4Q86UP3 3567 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ITPR1Q14643 2758 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 TRAV1-2A0A0B4J238 106 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 IGSF23A1L1A6 192 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ANKUB1A6NFN9 424 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 SERINC4A6NH21 518 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 IFITM5A6NNB3 132 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 FAM166BA8MTA8 275 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 MS4A18H0YCH9 400 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 OR4Q2P0C623 313 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 CD1DP15813 335 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 GNLYP22749 145 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 LMO1P25800 156 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 GLIPR1P48060 266 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms