RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MBOAT4Q96T53 435 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 COMMD4Q9H0A8 199 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 ZCCHC4Q9H5U6 513 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 MOB1AQ9H8S9 216 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 KRT84Q9NSB2 600 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 HSPG2P98160 4391 aa11.13□□□□□ -0.63
VAMP4-202ENST00000367740 NPIPB11E5RHQ5 1161 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 LOC110117498-PIK3R3F6TDL0 507 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 SLC33A1O00400 549 aaPredicted RBP11.12□□□□□ -0.63
VAMP4-202ENST00000367740 PRODHO43272 600 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 ZNF254O75437 659 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 E2F6O75461 281 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 IGHV3-11P01762 117 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 ZNF44P15621 663 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 CCL1P22362 96 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 HTR1FP30939 366 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
VAMP4-202ENST00000367740 HMGA2P52926 109 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 C19orf54Q5BKX5 351 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 FLYWCH2Q96CP2 140 aaKnown RBP11.12□□□□□ -0.63
VAMP4-202ENST00000367740 HOPXQ9BPY8 73 aaPredicted RBP11.12□□□□□ -0.63
VAMP4-202ENST00000367740 CHST5Q9GZS9 411 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 PLEKHA1Q9HB21 404 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 ABCD2Q9UBJ2 740 aa11.12□□□□□ -0.63
VAMP4-202ENST00000367740 MRM2Q9UI43 246 aaKnown RBP11.12□□□□□ -0.63
VAMP4-202ENST00000367740 IGHV7-81A0A0B4J1V7 117 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 IZUMO1RA6ND01 250 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 BLVRBP30043 206 aaPredicted RBP11.11□□□□□ -0.63
VAMP4-202ENST00000367740 SSTR5P35346 364 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 SCN1BQ07699 218 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 Q6P435 159 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 SLC16A12Q6ZSM3 486 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 YIPF7Q8N8F6 280 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 BBS1Q8NFJ9 593 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 RFESDQ8TAC1 157 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 MCUR1Q96AQ8 359 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 YIPF3Q9GZM5 350 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 KIF25Q9UIL4 384 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 OR52A1Q9UKL2 312 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 IKZF2Q9UKS7 526 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 RAB21Q9UL25 225 aa11.11□□□□□ -0.63
VAMP4-202ENST00000367740 IGKV1-12A0A0C4DH73 117 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 A0A1B0GVY2 172 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 TNFRSF11BO00300 401 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 GATBO75879 557 aaKnown RBP11.1□□□□□ -0.63
VAMP4-202ENST00000367740 CNIH1O95406 144 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 CYB5AP00167 134 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 IGKV1D-12P01611 117 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 HLA-DRB1P01911 266 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 SLC2A5P22732 501 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 LCN12Q6JVE5 192 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 IL34Q6ZMJ4 242 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 PLEKHG7Q6ZR37 379 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 ZNF565Q8N9K5 539 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 CHST4Q8NCG5 386 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 OR51T1Q8NGJ9 327 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 SPACA5Q96QH8 159 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 SIGLEC8Q9NYZ4 499 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 KLK5Q9Y337 293 aaPredicted RBP11.1□□□□□ -0.63
VAMP4-202ENST00000367740 R4GMQ9 66 aa11.1□□□□□ -0.63
VAMP4-202ENST00000367740 MEIKINA0A087WXM9 373 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 A0A1W2PN81 502 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 ARPC1BO15143 372 aaKnown RBP11.09□□□□□ -0.63
VAMP4-202ENST00000367740 KRT36O76013 467 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 CCNB2O95067 398 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 MRPL3P09001 348 aaKnown RBP11.09□□□□□ -0.63
VAMP4-202ENST00000367740 C21orf33P30042 268 aaPredicted RBP11.09□□□□□ -0.63
VAMP4-202ENST00000367740 CHRNA7P36544 502 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 RBP2P50120 134 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 RPS7P62081 194 aaKnown RBP11.09□□□□□ -0.63
VAMP4-202ENST00000367740 NDPQ00604 133 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 RAB40BQ12829 278 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 PPP1R8Q12972 351 aaKnown RBP11.09□□□□□ -0.63
VAMP4-202ENST00000367740 MMDQ15546 238 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 ECSCRQ19T08 205 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 SLC35D3Q5M8T2 416 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 OR10A7Q8NGE5 316 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 TEX47Q8TBZ9 253 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 MRGPRDQ8TDS7 321 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 DGCR6LQ9BY27 220 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 WFDC10AQ9H1F0 79 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 GORASP2Q9H8Y8 452 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 SLC25A19Q9HC21 320 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 FBXO7Q9Y3I1 522 aa11.09□□□□□ -0.63
VAMP4-202ENST00000367740 HSPB6O14558 160 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 NDUFAB1O14561 156 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 MAGEB4O15481 346 aaPredicted RBP11.08□□□□□ -0.64
VAMP4-202ENST00000367740 ATP1B3P54709 279 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 CD81P60033 236 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 ODF4Q2M2E3 257 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 CPOQ8IVL8 374 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 Q8N402 240 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 LINC00311Q8N616 119 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 DEFB125Q8N687 156 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 DNAAF1Q8NEP3 725 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 ASB17Q8WXJ9 295 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 OVOL2Q9BRP0 275 aa11.08□□□□□ -0.64
VAMP4-202ENST00000367740 FOXA2Q9Y261 457 aaPredicted RBP11.08□□□□□ -0.64
VAMP4-202ENST00000367740 IGKV1-9A0A0C4DH69 117 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 A0A0J9YWU9 116 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms