RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PIGAP37287 484 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 FOXL2P58012 376 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 UBE2V2Q15819 145 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM128Q5BJH2 165 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 DICER1Q9UPY3 1922 aaKnown RBP7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ANKRD12Q6UB98 2062 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 A4D1N5 150 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 J3QW42 95 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 DHRS3O75911 302 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ATP5LO75964 103 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 TFPI2P48307 235 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 CNN1P51911 297 aaKnown RBP7.65□□□□□ -1.18
SYNE1-206ENST00000367253 FAM78BQ5VT40 261 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 AGBL4Q5VU57 503 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ZDHHC22Q8N966 263 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 BEND2Q8NDZ0 799 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 OR5AU1Q8NGC0 362 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM158Q8WZ71 300 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 MMP26Q9NRE1 261 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 RNF7Q9UBF6 113 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 NAGKQ9UJ70 344 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 TMED3Q9Y3Q3 217 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ASB1Q9Y576 335 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 B9A039 149 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 TNFSF11O14788 317 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 LILRA1O75019 489 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 HRASP01112 189 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 CCL4P13236 92 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 HOXC5Q00444 222 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 OR1Q1Q15612 314 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF506Q5JVG8 444 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 SPANXN5Q5MJ07 72 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 FDX2Q6P4F2 183 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 OR52I1Q8NGK6 324 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 WNT2BQ93097 391 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 C2orf50Q96LR7 162 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 PBOV1Q9GZY1 135 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 CYSLTR1Q9Y271 337 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF443Q9Y2A4 671 aaPredicted RBP7.65□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF593O00488 134 aaPredicted RBP7.65□□□□□ -1.19
SYNE1-206ENST00000367253 SIVA1O15304 175 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 B4GALNT1Q00973 533 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 SLC35D3Q5M8T2 416 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 TMEM92Q6UXU6 159 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 DOK3Q7L591 496 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 CA13Q8N1Q1 262 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 ASCL2Q99929 193 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 TMUB1Q9BVT8 246 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 CHST5Q9GZS9 411 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 WDR76Q9H967 626 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 CA10Q9NS85 328 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 FLVCR1Q9Y5Y0 555 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 WSB1Q9Y6I7 421 aa7.65□□□□□ -1.19
SYNE1-206ENST00000367253 LIFP15018 202 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 ALOX5APP20292 161 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 GALR1P47211 349 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 FOXA1P55317 472 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 DGCR2P98153 550 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 PRTGQ2VWP7 1150 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 RNASE6Q93091 150 aaKnown RBP7.64□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF707Q96C28 371 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-206ENST00000367253 CXXC4Q9H2H0 198 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 INSIG2Q9Y5U4 225 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 ATAD5Q96QE3 1844 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 TRBV4-1A0A0J9YWV2 114 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 MEX3AA1L020 520 aaKnown RBP7.64□□□□□ -1.19
SYNE1-206ENST00000367253 DIRC3C9JPN6 131 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 RAB27BO00194 218 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 SYT14P1Q58G82 188 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 TMEM64Q6YI46 380 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 NR2C2APQ86WQ0 139 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 RPS4Y2Q8TD47 263 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 FOXB1Q99853 325 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 TEX101Q9BY14 249 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 COA4Q9NYJ1 87 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 TMEM129A0AVI4 362 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 OGG1O15527 345 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 SLC25A5P05141 298 aaKnown RBP7.64□□□□□ -1.19
SYNE1-206ENST00000367253 SELLP14151 372 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 C18orf21Q32NC0 220 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-206ENST00000367253 GTSCR1Q86UQ5 136 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 RDH5Q92781 318 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 ADTRPQ96IZ2 230 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 SRSF8Q9BRL6 282 aaKnown RBP7.64□□□□□ -1.19
SYNE1-206ENST00000367253 ZMAT4Q9H898 229 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 TMEM140Q9NV12 185 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 SERGEFQ9UGK8 458 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 FITM1A5D6W6 292 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 WISP1O95388 367 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 CD33P20138 364 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 CDX1P47902 265 aaPredicted RBP7.64□□□□□ -1.19
SYNE1-206ENST00000367253 SNRPNP63162 240 aaKnown RBP7.64□□□□□ -1.19
SYNE1-206ENST00000367253 CSNK1G2P78368 415 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 PPP1R1AQ13522 171 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 SHBQ15464 509 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 OR51H1Q8NH63 302 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 PPP1R1CQ8WVI7 109 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 ABHD17AQ96GS6 310 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 MED20Q9H944 212 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms