RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LRFN3Q9BTN0 628 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 SLC2A8Q9NY64 477 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 PLCE1Q9P212 2302 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 NTF3P20783 257 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 C1orf100Q5SVJ3 147 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 C1QTNF6Q9BXI9 259 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 TRAV8-7A0A075B6U6 113 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR2W5A6NFC9 320 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 J3QW42 95 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR5I1Q13606 314 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 PLPPR5Q32ZL2 321 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 SLC26A1Q9H2B4 701 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 PILRAQ9UKJ1 303 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 MEOX2P50222 304 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR11H7Q8NGC8 314 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR10G4Q8NGN3 311 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR10G9Q8NGN4 311 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR10G7Q8NGN6 311 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 TMEM230Q96A57 120 aa10.58□□□□□ -0.72
CDC42BPA-203ENST00000366766 RPL11P62913 178 aaKnown RBP10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 DEFB109BQ30KR1 87 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 RNF122Q9H9V4 155 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 ZFP36L2P47974 494 aaKnown RBP10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 LYRM7Q5U5X0 104 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 GFRALQ6UXV0 394 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 PRSS27Q9BQR3 290 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 SPATA46Q5T0L3 261 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 M0QZK8 103 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 GGCTO75223 188 aaKnown RBP10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 FAM209AQ5JX71 171 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 NECAP1Q8NC96 275 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 PERPQ96FX8 193 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 IGKV1-8A0A0C4DH67 115 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 IGHMP01871 453 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 VSIG8P0DPA2 414 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 HOXA6P31267 233 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 CLCF1Q9UBD9 225 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 USF3Q68DE3 2245 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 Q3ZCU0 254 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 BTNL3Q6UXE8 466 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 FA2HQ7L5A8 372 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 CBY1Q9Y3M2 126 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 A0A1W2PPC1 479 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 A0A1W2PQF6 199 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 PRKNO60260 465 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 HAND1O96004 215 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 SAXO1Q8IYX7 474 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 RAB1BQ9H0U4 201 aa10.57□□□□□ -0.72
CDC42BPA-203ENST00000366766 CTXND1A0A1B0GTU2 59 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 OPRK1P41145 380 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 P2RY6Q15077 328 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 SLC35E3Q7Z769 313 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 MAFAQ8NHW3 353 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 FAM90A26D6RGX4 464 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 GRAMD2BQ96HH9 432 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 PSG11Q9UQ72 335 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 MLF1P58340 268 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 FAM3BP58499 235 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 BSXQ3C1V8 233 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 UBAC2Q8NBM4 344 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 PIPOXQ9P0Z9 390 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 FOXS1O43638 330 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 PEBP1P30086 187 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 STUMQ69YW2 141 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 H0Y980 276 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 CXorf1O96002 111 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 TNFAIP6P98066 277 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 TMEM267Q0VDI3 215 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 FBXW9Q5XUX1 488 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 FAM181AQ8N9Y4 354 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR10A7Q8NGE5 316 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 ORM1P02763 201 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 RPEQ96AT9 228 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 ZNF835Q9Y2P0 537 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 NLRC5Q86WI3 1866 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 C1RLQ9NZP8 487 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 IFNL4K9M1U5 179 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 ATP5IP56385 69 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 LYG1Q8N1E2 194 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 C11orf94C9JXX5 98 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 GREM1O60565 184 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 RFC3P40938 356 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 PMP22Q01453 160 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 GPR35Q9HC97 309 aa10.56□□□□□ -0.72
CDC42BPA-203ENST00000366766 IGHV5-10-1A0A0J9YXX1 117 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 M0R143 59 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 PLXND1Q9Y4D7 1925 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 GEMIN2O14893 280 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 DYNLT3P51808 116 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 PDZD11Q5EBL8 140 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 OR2M3Q8NG83 312 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 CTHRC1Q96CG8 243 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 ACY3Q96HD9 319 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 ONECUT2O95948 504 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
CDC42BPA-203ENST00000366766 PGLYRP3Q96LB9 341 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms