RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TNFSF11O14788 317 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 LSM6P62312 80 aaKnown RBP13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 CXorf66Q5JRM2 361 aaPredicted RBP13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 ANGPTL4Q9BY76 406 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 TUBD1Q9UJT1 453 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 MMP17Q9ULZ9 603 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 POLDIP2Q9Y2S7 368 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 EGR4Q05215 589 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 OR10G8Q8NGN5 311 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 STARD4Q96DR4 205 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 TMEM147Q9BVK8 224 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 RTL8AQ9BWD3 113 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 GYPAP02724 150 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 ADCYAP1P18509 176 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 CD27P26842 260 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 SPCS3P61009 180 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 ACY3Q96HD9 319 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 ATG101Q9BSB4 218 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 SH2D1BO14796 132 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 RAMP1O60894 148 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 PATE4P0C8F1 98 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 IL11P20809 199 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 HOXA6P31267 233 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 GALNSP34059 522 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 OR10V1Q8NGI7 309 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 FGF11Q92914 225 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 C10orf35Q96D05 121 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 ZNF552Q9H707 407 aaPredicted RBP13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 BRCA1P38398 1863 aaKnown RBP13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 CCR5P51681 352 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 TMEM211Q6ICI0 200 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 GINS3Q9BRX5 216 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 PSME4Q14997 1843 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 DHRS7CA6NNS2 312 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 LYPD3O95274 346 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 CD5P06127 495 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 TMEM183AQ8IXX5 376 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 FAM206AQ9NX38 181 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 MTCH2Q9Y6C9 303 aa13.97□□□□□ -0.17
CLSTN1-201ENST00000361311 A0A1W2PPC4 97 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 AGAP20933 346 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 MYPOPQ86VE0 399 aaPredicted RBP13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 Q8WTZ3 238 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 ATP6V1FQ16864 119 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 ZNF519Q8TB69 540 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 LANCL2Q9NS86 450 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 B3GAT1Q9P2W7 334 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 PISDQ9UG56 409 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 HEATR5BQ9P2D3 2071 aa13.96□□□□□ -0.17
CLSTN1-201ENST00000361311 SIAH2O43255 324 aa13.96□□□□□ -0.18
CLSTN1-201ENST00000361311 ZNF253O75346 499 aa13.96□□□□□ -0.18
CLSTN1-201ENST00000361311 IFI6P09912 130 aa13.96□□□□□ -0.18
CLSTN1-201ENST00000361311 OR3A1P47881 315 aa13.96□□□□□ -0.18
CLSTN1-201ENST00000361311 SERF2P84101 59 aa13.96□□□□□ -0.18
CLSTN1-201ENST00000361311 MEF2BQ02080 365 aaPredicted RBP13.96□□□□□ -0.18
CLSTN1-201ENST00000361311 SFTPA2Q8IWL1 248 aa13.96□□□□□ -0.18
CLSTN1-201ENST00000361311 A0A1W2PPE3 182 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 BCAT2O15382 392 aaPredicted RBP13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 RABEPKQ7Z6M1 372 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 C11orf42Q8N5U0 333 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 MGAMO43451 1857 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 SCN10AQ9Y5Y9 1956 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 CTXND1A0A1B0GTU2 59 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 TAS2R45P59539 299 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 ZXDAP98168 799 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 OR8B8Q15620 311 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 DTD1Q8TEA8 209 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 CACNA1DQ01668 2161 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 LINC00114Q6XXX2 140 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 OR1L3Q8NH93 324 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 SGMS2Q8NHU3 365 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 CORO2AQ92828 525 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 APH1AQ96BI3 265 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 RTBDNQ9BSG5 229 aaPredicted RBP13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 ABLIM2Q6H8Q1 611 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 GALNT14Q96FL9 552 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 KCNK17Q96T54 332 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 TMEM222Q9H0R3 208 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 P4HTMQ9NXG6 502 aa13.95□□□□□ -0.18
CLSTN1-201ENST00000361311 FAM166BA8MTA8 275 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 SRP19P09132 144 aaKnown RBP13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 NDUFB7P17568 137 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 COL9A1P20849 921 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 UBE2G1P62253 170 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 MRGPRFQ96AM1 343 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 WFIKKN1Q96NZ8 548 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 TMEM74BQ9NUR3 256 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 A0A1B0GU03 582 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 GPR12P47775 334 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 EXT1Q16394 746 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 C9orf40Q8IXQ3 194 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 RBMXL3Q8N7X1 1067 aaKnown RBP13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 DUSP23Q9BVJ7 150 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 FREM3P0C091 2139 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 ZP4Q12836 540 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 TRIM61Q5EBN2 209 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 FAM162BQ5T6X4 162 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 SPNS3Q6ZMD2 512 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms