RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 PRR14LQ5THK1 2151 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 C9JQL5 133 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 PRSS44E7EML9 344 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 NAPSAO96009 420 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 GLP1RP43220 463 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 PHLDA2Q53GA4 152 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 GPR157Q5UAW9 335 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 Q6ZT83 130 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 SYT3Q9BQG1 590 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 SMIM3Q9BZL3 60 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 FAM212BQ9NTI7 297 aaPredicted RBP19.27■□□□□ 0.68
LDB1-201ENST00000361198 SMPD2O60906 423 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 SCGB1D2O95969 90 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 SEC11BP0C7V7 166 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 AADACP22760 399 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 CD80P33681 288 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 GABRA6Q16445 453 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 C9orf106Q8NAJ2 232 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 PRSS33Q8NF86 280 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 OR2J1Q9GZK6 312 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 LHX6Q9UPM6 363 aa19.27■□□□□ 0.68
LDB1-201ENST00000361198 NFYBP25208 207 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 ERVS71-1P61550 626 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 VWA1Q6PCB0 445 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 FBXW12Q6X9E4 464 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 LGI3Q8N145 548 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 C17orf78Q8N4C9 275 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 KIRREL1Q96J84 757 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 Q9N2K0 584 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 PRR33A8MZF0 331 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 RHBDL1O75783 438 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 OR8U9P0C7N5 309 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 KIR2DL2P43627 348 aaPredicted RBP19.26■□□□□ 0.67
LDB1-201ENST00000361198 ID4P47928 161 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 RAB13P51153 203 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 UCP2P55851 309 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 FAM76BQ5HYJ3 339 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 OR11L1Q8NGX0 322 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 OR8U1Q8NH10 309 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 OR51I2Q9H344 312 aa19.26■□□□□ 0.67
LDB1-201ENST00000361198 MEX3AA1L020 520 aaKnown RBP19.25■□□□□ 0.67
LDB1-201ENST00000361198 AGPAT2O15120 278 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 GPR137BO60478 399 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 PPYP01298 95 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 GLI4P10075 376 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 HOXA1P49639 335 aaPredicted RBP19.25■□□□□ 0.67
LDB1-201ENST00000361198 IL24Q13007 206 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 IL13RA2Q14627 380 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 SWI5Q1ZZU3 235 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 Q6ZS49 121 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 NEK7Q8TDX7 302 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 SARAFQ96BY9 339 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 BSCL2Q96G97 398 aaPredicted RBP19.25■□□□□ 0.67
LDB1-201ENST00000361198 GINS3Q9BRX5 216 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 RSRP1Q9BUV0 290 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 CDH20Q9HBT6 801 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 INTS1Q8N201 2190 aaKnown RBP19.25■□□□□ 0.67
LDB1-201ENST00000361198 ZNF891A8MT65 544 aaPredicted RBP19.25■□□□□ 0.67
LDB1-201ENST00000361198 J3QW42 95 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 CEACAM4O75871 244 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 SCTP09683 121 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 DANCRP0C864 163 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 P2RY1P47900 373 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 PPP1CBP62140 327 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 MRPL49Q13405 166 aaKnown RBP19.25■□□□□ 0.67
LDB1-201ENST00000361198 COMMD1Q8N668 190 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 DMBX1Q8NFW5 382 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 TAAR6Q96RI8 345 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 PLSCR2Q9NRY7 297 aa19.25■□□□□ 0.67
LDB1-201ENST00000361198 HERV-K104P61576 105 aa19.24■□□□□ 0.67
LDB1-201ENST00000361198 PLK3Q9H4B4 646 aa19.24■□□□□ 0.67
LDB1-201ENST00000361198 WFDC1Q9HC57 220 aa19.24■□□□□ 0.67
LDB1-201ENST00000361198 GTF3C1Q12789 2109 aa19.24■□□□□ 0.67
LDB1-201ENST00000361198 BORCS7-ASMTA0A0B4J1R7 106 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 DIRAS3O95661 229 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 SPP1P10451 314 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 PAX6P26367 422 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 SRSF7Q16629 238 aaKnown RBP eCLIP19.23■□□□□ 0.672e-8■■■□□ 15.5
LDB1-201ENST00000361198 FAM58AQ8N1B3 248 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 SUMF2Q8NBJ7 301 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 SCRT1Q9BWW7 348 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 PKIBQ9C010 78 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 ZDHHC8Q9ULC8 765 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 TMED3Q9Y3Q3 217 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 NOVA1P51513 510 aaKnown RBP19.23■□□□□ 0.67
LDB1-201ENST00000361198 FOXF2Q12947 444 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 ALKBH6Q3KRA9 238 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 WDR86Q86TI4 376 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 CCDC71LQ8N9Z2 235 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 OR52M1Q8NGK5 317 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 RXFP4Q8TDU9 374 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 CACFD1Q9UGQ2 172 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 KPTNQ9Y664 436 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 CEP250Q9BV73 2442 aa19.23■□□□□ 0.67
LDB1-201ENST00000361198 HS3ST1O14792 307 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 ST8SIA3O43173 380 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 CRYBA1P05813 215 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 CEACAM1P13688 526 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 HERPUD1Q15011 391 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 PEA15Q15121 130 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms