RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ADCYAP1P18509 176 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 RBMXP38159 391 aaKnown RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ARHGDIBP52566 201 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 PIGYQ3MUY2 71 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 Q6ZPA2 131 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 COLCA1Q6ZS62 124 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 OSR2Q8N2R0 312 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 CPEB3Q8NE35 698 aaKnown RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 OR4A4PQ8NGN8 299 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 GALNT14Q96FL9 552 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 TECTBQ96PL2 329 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 CMSS1Q9BQ75 279 aaKnown RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ZPBPQ9BS86 351 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 P4HTMQ9NXG6 502 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 GSKIPQ9P0R6 139 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 LOXL2Q9Y4K0 774 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 SPENQ96T58 3664 aaKnown RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 FAM90A8PA6NJQ4 464 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 ABCD4O14678 606 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 NUPL2O15504 423 aaKnown RBP6.24□□□□□ -1.41
CLCN3-202ENST00000360642 DEDDO75618 318 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 PLATP00750 562 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 FAM90A13PP0C7W8 464 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 FAM90A24PP0C7X0 464 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 ZFP36P26651 326 aaKnown RBP6.24□□□□□ -1.41
CLCN3-202ENST00000360642 GDF1P27539 372 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 PMELP40967 661 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 ZXDAP98168 799 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 DEFA5Q01523 94 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 IAH1Q2TAA2 248 aaPredicted RBP6.24□□□□□ -1.41
CLCN3-202ENST00000360642 GGNBP1Q5YKI7 109 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 LRTM2Q8N967 370 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 SMIM8Q96KF7 97 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 NKX6-2Q9C056 277 aaPredicted RBP6.24□□□□□ -1.41
CLCN3-202ENST00000360642 MMP26Q9NRE1 261 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 TOR1AO14656 332 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 XRCC2O43543 280 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 CTRB1P17538 263 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 OPRM1P35372 400 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 PIGPP57054 158 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM187Q14656 261 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 CTRB2Q6GPI1 263 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 SPINK14Q6IE38 97 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 FBXL14Q8N1E6 418 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM105Q8N8V8 129 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 FNDC9Q8TBE3 224 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 DYRK2Q92630 601 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 ARL11Q969Q4 196 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 MRPL24Q96A35 216 aaKnown RBP6.24□□□□□ -1.41
CLCN3-202ENST00000360642 RAB9BQ9NP90 201 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 C12orf4Q9NQ89 552 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 ATPIF1Q9UII2 106 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 ST3GAL6Q9Y274 331 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 LAMA5O15230 3695 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 AHCTF1Q8WYP5 2266 aa6.24□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF816-ZNF321PA0A0X1KG74 233 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 FAM74A7A6NL05 159 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF850A8MQ14 1090 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 NEURL1O76050 574 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 MMP9P14780 707 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 S100A10P60903 97 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 FAM74A3Q4VXF1 159 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PABPC1L2AQ5JQF8 200 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 TSPO2Q5TGU0 170 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM268Q5VZI3 342 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 RPL7L1Q6DKI1 246 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 OR2A2Q6IF42 318 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 IL34Q6ZMJ4 242 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 HAPLN4Q86UW8 402 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 CALHM1Q8IU99 346 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 BATF2Q8N1L9 274 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 DDA1Q9BW61 102 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 LINC00470Q9BZP3 86 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 NAA60Q9H7X0 242 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 SLC7A11Q9UPY5 501 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 CARHSP1Q9Y2V2 147 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 NPIPB6E9PJ23 425 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 RPL36A-HNRNPH2H7BZ11 118 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PAGE4O60829 102 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF883P0CG24 379 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF728P0DKX0 622 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 RPL12P30050 165 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 LHX2P50458 406 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 AKR1C2P52895 323 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 RBM11P57052 281 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 AKR1C1Q04828 323 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PDSS1Q5T2R2 415 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM211Q6ICI0 200 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 DHRS13Q6UX07 377 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PIGCQ92535 297 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 NARS2Q96I59 477 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 C18orf12Q96KH6 178 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 TAF9BQ9HBM6 251 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 AMDHD2Q9Y303 409 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 FAM186AA6NE01 2351 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF705EA8MWA4 302 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PDCD6O75340 191 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 GOSR1O95249 250 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 CST4P01036 141 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 IFNA21P01568 189 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms