RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 P2RY1P47900 373 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 LIAT1Q6ZQX7 453 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 TMEM136Q6ZRR5 245 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 OVCH2Q7RTZ1 564 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 CBLN4Q9NTU7 201 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 A0A1W2PS18 150 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 DHRS7CA6NNS2 312 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 OR1B1Q8NGR6 318 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 OR4C3Q8NH37 302 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 ABHD1Q96SE0 405 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 NFAM1Q8NET5 270 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 LRRC3BQ96PB8 259 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 HYAL1Q12794 435 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 SLC35E3Q7Z769 313 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 ABHD3Q8WU67 409 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 MBNL1Q9NR56 388 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 MMP17Q9ULZ9 603 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 A0A096LPE4 126 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 A0A1W2PPZ6 126 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 SRSF10O75494 262 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 UBE2L3P68036 154 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 PIK3IP1Q96FE7 263 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 WFIKKN1Q96NZ8 548 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 PARP11Q9NR21 331 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 OOEPA6NGQ2 149 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 TRGC2P03986 189 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 DEGS2Q6QHC5 323 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 OR4D9Q8NGE8 314 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 ZCCHC14Q8WYQ9 949 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 LRP6O75581 1613 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 COL8A1P27658 744 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 AGERQ15109 404 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 RSPO2Q6UXX9 243 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 RFLNAQ6ZTI6 216 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 KLK10O43240 276 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 PAPPA-AS1Q5QFB9 102 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 A0A1W2PR48 441 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 NRG2O14511 850 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 TNFSF10P50591 281 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 LRRC75AQ8NAA5 344 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 SGK494Q96LW2 274 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 LMO7DNF2Z398 122 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 M0R296 226 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 WNT9BO14905 357 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 MVDP53602 400 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 TMEM255AQ5JRV8 349 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 FAHD2BQ6P2I3 314 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 PARM1Q6UWI2 310 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 C20orf196Q8IYI0 205 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 MS4A6EQ96DS6 147 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 KCNAB1Q14722 419 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 FGF14Q92915 247 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 TMEM38BQ9NVV0 291 aa11.73□□□□□ -0.53
SRGAP3-201ENST00000360413 TNFAIP6P98066 277 aaPredicted RBP11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 JOSD1Q15040 202 aaPredicted RBP11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 ZNF841Q6ZN19 808 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 NUP37Q8NFH4 326 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 RNF133Q8WVZ7 376 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 BCL2L10Q9HD36 194 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 TMEFF2Q9UIK5 374 aaPredicted RBP11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 CD3EP07766 207 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 CDX1P47902 265 aaPredicted RBP11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 MRGPRGQ86SM5 289 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 WDFY1Q8IWB7 410 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 SPEM1Q8N4L4 309 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 CRISPLD2Q9H0B8 497 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 HEXA-AS1Q9H8Q6 139 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 COA4Q9NYJ1 87 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 OPN4Q9UHM6 478 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 MBD1Q9UIS9 605 aaPredicted RBP11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 TM4SF4P48230 202 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 MED29Q9NX70 200 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 POLR2GP62487 172 aaKnown RBP eCLIP11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 TCTN1Q2MV58 587 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 OR10V1Q8NGI7 309 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 GGACTQ9BVM4 153 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 SHANK1Q9Y566 2161 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 B4GALT1P15291 398 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 LPAR6P43657 344 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 EMDP50402 254 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 ERRFI1Q9UJM3 462 aaPredicted RBP11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 SPRY3O43610 288 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 CRHP06850 196 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 HOXA6P31267 233 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 PYCR3Q53H96 274 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 C12orf73Q69YU5 71 aa11.72□□□□□ -0.53
SRGAP3-201ENST00000360413 ADAP1O75689 374 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 NPBWR2P48146 333 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 HEATR5AQ86XA9 2040 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 ICOSLGO75144 302 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 ABLIM3O94929 683 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 NGFP01138 241 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms